Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00370 ATGATGGCAGAGTTTGTTGGTGGTGGGACATTTCTTTGGTCTGTGTTTCAAATGATTCGAGAGAGATTAGCTTCAACAGTGGTCATAGATTACTTCGATGAAGAGCTGGTGAACAAACTTCAAGTCACACTGAATTCTATCAATGATGTGATGAATGATGCAGAGAGAAAGCAGTACCAAAACCTAAACGTAAAGAATTGGTTTGATGATCTCAAACATGTGTTATATGAAGTAGAGCAGCTATTGGATGTGGTTGCAATTGACGCACAACCAACAAAAAGCAAGATAGGACGCTTTATTTCAGCAACTATTAATCGATTTGAATCTAGGATTAAAGTATTGCTCAAGAGGCTAATTGTTCTTGAAGTGCAAAAGAACAGATTGGGACTTGAAAAAGATAGTAAAATTAGCTTCAGTCAGCAATTGTCAAGGGAATTCACAACTGAATTTTGTGTGGATGATGAATCTGTCATATATGGTAGAGAGCATGAGAAAGAGGAAATAATCCATTTTTTACTTGCAGACACTGACAGTATATCCATAATCAGTATAGTGGGTCTGGCTGGGATGGGTAAGACAACCCTTGCCCAACTTGTTTTCAATGACCACAGGATTACGGAGCAATTCGATTTTAAAGTTTGGCTCTGTGTTTCAGAATCATTTAATCTTATTCGTCTCACCCGATCAATTCTCAAGTCAATTGATTCTTCAGCAGCAGATTGTGAAAACTATATACTCCAACGTGAATTGCAACAAAGGCTAGCAGGCAAAAGATATTTGCTTGTTCTAGATGATGTTTGGAACAAAGATAAGCCTACATGGGACAATTTCGTACTTCGTTTTAGTGGATCTTCAGGATGTAAGATGATCGTGACAACACGTGATATGGAAGTGGCATCAGTTACAGGGTCTACATGGTTAATTCATTTAAAACAATTGGAGGAGAATGTCAGTTGGAGTTTATTTGTGAAATATGCTTTCCGAGGTAGGAATGTGTTTGAATATCCAAACCTTGAATTGATAGGagagaaaatagtaaaaaagtGTGCGGGGTTACCTTTAGCTCTGAAAACATTGGGGAGTATCTTGCAAACAATATCATCTGAACCTGAATGGGTTAAGATATTAGAAACTGAGTTGTGGCATTTACCCGAGGTTGACAACCACATTTACTCCATACTGAGATCGAGTTACTTTAACCTACCTTCCAATCTGAAGCGTTGTTTTACTTATTGTTCTGTATTTCCCAAGGGCTATGAGTTTGAAAAGGCTGAATTAATCAAGCTTTGGATGGGAGAAGGTTTGCTTAAGTGTTGTGGAAGAGACAAAACCGAAGAAGAGTTAGGTAATGAATTCTTTGATCATCTAGTCTCAATATCGTTTTTCCAACAATCAGTGATGATGCCATTACGGACTGGTAAGTACTACTTCACCATGCATGATCTTGTCAATGATTTAGCGAAATCGGTGTCAGGAGAATCCTACTTACGAATAGAGGGTGACAATGTGCAAGATATCCCTGAAAGGACGCGTCACATCTGGTGCTGCCTTGATTTGAATGGTGGTGATAGAAAACTAGAGCTTATTAGTAAAATTGAGGGACTAAACGGTTTGATCGTAGAAGCACATGGCTATGGTGACCGGCGCTTTAGGATAAGCACCAATGTGCAGCAACATTTGTTTTCAAGACTAAAATATTTGCGGATGTTATCTTTCTCTCGTTGCAATCTCTTAGAGCTAGCTGATGAGATAAGAAATTTAAAGCTTCTGCGCCATCTAGACCTTTCTTACACTGAGATTATAAGCTTACCTAATTCCATTTGTATGCTGTATAATTTGCAGACACTCTTATTGCAAGATTGTTTTAAACTGATTGAGCTCCCTTTGGATCTTTGTAAACTCATCAATTTATGTCATCTTAATTTGGAAGGAACTCATATAAAGAAGATGCCAATGAAGATAGGAGGGTTAAACAATCTTCAGATGCTGACTGATTTTGTTGTGGGAGAGCAGCATGGATTTGATATTAAGCAGTTGGGGAAACTCAACCAACTACGTGGAAAGCTTCAAATTTCAGGGTTGGAAAATGTCATTGATCCCGCACATGCTGCTACGGCAAATTTGAAAGATAAGAAACATTTAGAAGAATTAACTATGTCATATGGTGAATGGAGAGAAATGGATGACTCATTAATTGAACCACATGTCTCTGTCTTGGATGCTCTTCAACCAAATAGAAACCTCATGAGGCTCACCATCAAAGATTACAGAGATAGTAGCTTTCCAATATGGCTTGAGGATCGTCAATTACCCAATTTAGTTTCTCTTAAATTATTGGGATGTAAACTTCGTTCACAGATGCCACCACTTGGGCAGTTCCCCTCTCTCAAGAAGCTTTCCATTTCTGGCTGTGATGGAATAGAGATCATCGGTACAGAGTTTTGCGGCTATAATTCATCAAATGTTCCATTTAGATCACTTGAAACTTTGCAATTTGAGCACATGTATGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTTCAAGAGCTTTGTATAAAACATTGTCCCAAGTTGAAAAGTGCCCTGCCTCAATACCTTCCTTCTTTGCAAAAATTGGAGATTATTGATTGTCAAGAGTTAGAGTCTTCAATTCCTAAGGCTGGTAATATCAGTCAGCTAGAACTAAAGAGGTCCGATGACATTTGGATAAATGAATTTCCATTCAGCTTGAAAAGTGTCACGCTTTGTGGAACTCAGGTCATAGAATCCATGTTAGAGAAATTTCTATCTTATTGTGTCTTTCTTGGGGAGTTGGAAGTTGAAGACTTCTTTGGTCCAAACCTTGAATGGTCTTCTTTGGAATTCAATAGCTGTATTTTTCTTCACACTCTAACCATAACAGGTTGGCACTCTTCTTCCTTGCCTTTTGCACTACACTTGTTCACCAATCTTAATTCTCTCGTGTTGTATGATTGTCCTTGGCTGGAATCGGTTTTAATGAGGCAGTTGCCTTCCAACCTCTGCAGCCTCCGAATAGAAAAATGCCCTAAATTGATGGGTTCGAGAGAAGAGTGGGGTTTGTTCCAACTCAATTCTCTGAAACAATTCAGTGTTGGTGATCATTTTGAAATCTTGGAATCCTTTCCGGATGAGAGTCTGCTGCCATCAACTATTAACTCTCTTGAGTTGACAAATTGTTCCAACTTAAGGATAATAAACTATAAAGGTCTTCTCCATCTCACTTCACTCGAATCTCTATATATTGAAGACTGCCCTTGTCTCGAGAGCTTGCCAGCGGAGGGTCTACCCAGCTCCCTTTCTACTTTGTCCATTCATGATTGTCCATTAATTAAGAAGCTCTACCAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCACATCCCTTCTGTGACGATTTCCTGA 3435 0.3875 MMAEFVGGGTFLWSVFQMIRERLASTVVIDYFDEELVNKLQVTLNSINDVMNDAERKQYQNLNVKNWFDDLKHVLYEVEQLLDVVAIDAQPTKSKIGRFISATINRFESRIKVLLKRLIVLEVQKNRLGLEKDSKISFSQQLSREFTTEFCVDDESVIYGREHEKEEIIHFLLADTDSISIISIVGLAGMGKTTLAQLVFNDHRITEQFDFKVWLCVSESFNLIRLTRSILKSIDSSAADCENYILQRELQQRLAGKRYLLVLDDVWNKDKPTWDNFVLRFSGSSGCKMIVTTRDMEVASVTGSTWLIHLKQLEENVSWSLFVKYAFRGRNVFEYPNLELIGEKIVKKCAGLPLALKTLGSILQTISSEPEWVKILETELWHLPEVDNHIYSILRSSYFNLPSNLKRCFTYCSVFPKGYEFEKAELIKLWMGEGLLKCCGRDKTEEELGNEFFDHLVSISFFQQSVMMPLRTGKYYFTMHDLVNDLAKSVSGESYLRIEGDNVQDIPERTRHIWCCLDLNGGDRKLELISKIEGLNGLIVEAHGYGDRRFRISTNVQQHLFSRLKYLRMLSFSRCNLLELADEIRNLKLLRHLDLSYTEIISLPNSICMLYNLQTLLLQDCFKLIELPLDLCKLINLCHLNLEGTHIKKMPMKIGGLNNLQMLTDFVVGEQHGFDIKQLGKLNQLRGKLQISGLENVIDPAHAATANLKDKKHLEELTMSYGEWREMDDSLIEPHVSVLDALQPNRNLMRLTIKDYRDSSFPIWLEDRQLPNLVSLKLLGCKLRSQMPPLGQFPSLKKLSISGCDGIEIIGTEFCGYNSSNVPFRSLETLQFEHMYEWKEWLCLEGFPLLQELCIKHCPKLKSALPQYLPSLQKLEIIDCQELESSIPKAGNISQLELKRSDDIWINEFPFSLKSVTLCGTQVIESMLEKFLSYCVFLGELEVEDFFGPNLEWSSLEFNSCIFLHTLTITGWHSSSLPFALHLFTNLNSLVLYDCPWLESVLMRQLPSNLCSLRIEKCPKLMGSREEWGLFQLNSLKQFSVGDHFEILESFPDESLLPSTINSLELTNCSNLRIINYKGLLHLTSLESLYIEDCPCLESLPAEGLPSSLSTLSIHDCPLIKKLYQKEGGERWHTISHIPSVTIS 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00370 1144 Pfam Rx N-terminal domain 14 95 IPR041118 -
Tsu03g00370 1144 Coils Coil 37 57 - -
Tsu03g00370 1144 CDD AAA 159 266 - -
Tsu03g00370 1144 Gene3D - 27 117 - -
Tsu03g00370 1144 PANTHER DISEASE RESISTANCE PROTEIN RP 27 1101 IPR044974 GO:0006952
Tsu03g00370 1144 Gene3D - 312 397 IPR042197 -
Tsu03g00370 1144 SUPERFAMILY L domain-like 479 887 - -
Tsu03g00370 1144 Gene3D Ribonuclease Inhibitor 907 1128 IPR032675 -
Tsu03g00370 1144 Gene3D Ribonuclease Inhibitor 548 906 IPR032675 -
Tsu03g00370 1144 Gene3D - 138 306 IPR027417 -
Tsu03g00370 1144 PANTHER OS05G0414200 PROTEIN 27 1101 - -
Tsu03g00370 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 412 IPR027417 -
Tsu03g00370 1144 Pfam NB-ARC domain 161 377 IPR002182 GO:0043531
Tsu03g00370 1144 Gene3D - 398 490 IPR036388 -
Tsu03g00370 1144 PRINTS Disease resistance protein signature 181 196 - -
Tsu03g00370 1144 PRINTS Disease resistance protein signature 253 267 - -
Tsu03g00370 1144 PRINTS Disease resistance protein signature 349 363 - -
Tsu03g00370 1144 PRINTS Disease resistance protein signature 585 601 - -
Tsu03g00370 1144 SUPERFAMILY RNI-like 824 1120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00370 Tsu-Chr3 3138508 3142071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00370 158 490 WRKY Transcription Factor Family AT5G45050 25.806 1.25e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00370 - - mtr:MTR_3g021170 1528.07