Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00364 ATGTATAATTCATTACAGATTGATACTGACAGGGTACAACGAAAGGGAACAATACGACGCTTTGTTTCAGGTTTTAAAATACAATCTGAATATAAAGTATTGCTACAGAGGCTAGATTTTCTTGCAGAACAAAAGGATATGTTTGGACTTCAAGAAGCAACAACTTGTGATAATCATGTATGGGAGAATCTATCAACTACTACATCTTTGGTGGATGAATCTTTCATATATGGTAGAGAGCATGAGAAAGAGGAAATCGTCCATTTTTTACTTGCAGACACTGACTGTGACAAGCAGATATCCATAATCAGTATAGTGGGTTTGGGTGGGATGGGTAAGACAGCCCTTGCCCAGCTTGTTTTCAATGATCACAGGATTAAAGAGCAATTTGAAATTAAAGCTTGGGTCTCTGTTTCACAATCTATAGGTCTTGTTAGTCTCGCCCAATCAATTCTCAAATCATTTCAATCTTCAGCAGCAGATAGTCAAGACTTGGAAATACTCCAACATCAATTGCAACAGAGGCTAACGGGCAAGAGATGTTTGCTTATTCTAGATGATGTGTGGAGCAGAAATAAGAATATGTTGGAGTGTTTACTACTTCCTTTTAGCCATGGATCTTCAGGAAGTAAGATTATCGTCACAACGCGAGACAAGGAAGTAGCATCAATCATGCTATCCACCCGGCTACTTCATTTAAAGCAATTGCAGGAGAATGACTCTTGGAGTTTATTTGTGAAACATGCTTTTCGAGGCAGGAATGTCGTAGAATATCCAGATCTTGAATTGATAGGCAAGAAAATAGTAGAAAAGTGTGGGGGGTTGCCTTTAGCTCTGAAAACATTGGGGAGTATCTTGCGAACAAAATCATCTGAATCTGAATGGGTCAAGATATTGGAAACTGATTTGTGCCGTAACGATGACAACAACATTAACCCCTTACTGAGGTTGAGTTACCTTAACCTCCCTTCCAATGTGAAACGTTGTTTTGCTTATTGTTCTATATTTCCAAAGGGCTATGAGTTTGACAAGGGTGGATTAATCAAGCTTTGGATGGCAGAAGGTTTGCTCAAGTGTTGGGGAAGAGACAATAGTGAAGAAGAGTTAGGTAATGAATTCTTCCATAATCTAGTGTCAATATCGTTTTTCCAACAATCAGTAATGCCAACATGGGCCGGTAAGTACTACTTCATCATACATAATATTGTCAATGAATTAGCAAAGTCAGTGTCAGGAGAATCCCGCTTACGTATAGAGAGTGACAATGTGCAAGATATACCTGAAAGGACACGTCACATCTGGTGCTGCCTTGATTTGAAAGATGGTGATAGAAAACTAGAGCATATTAGTAAAATTGAGGGACTACACAGTTTGACGGTAGAAGCACACGGCTATGTTGACCAACGCTTTAAGATAAGCACCAATGTGCagcaaaaattgttttcaagACTAAAATATTTGCGGATGTTGTCTTTCTCTAGTTGCAATCTCTTAGATCTAGCTGATGAGATAGGAAAGTTAAAGCTTATGTGCTATCTAGACCTTTCTTACACTGAGATTGCATGCTTACCTAATTCCATTTGTATGCTGTATAATTTGCAGACACTCTTATTGCAAGATTGTTTTAAACTGACTGAGCTCCCTTCAGATTTTTACAAACTCGTCAATTTACATCATCTTAATTTGGAaggaactagtataaaaaacATGCCAACAAAGATAGGAGGGTTAAACAATCTTGAGATGCTGACTGATTTTGTTGTGGGAGAGCAGCATGGAATTGATATTAAGCAGTTAGGGAAACTCAACCAACTTCGAGGAAAGCTTCGAATTTCAGGGTTGGAAAATGTCATTGATCCTGCAGATGTTGTGGCAGCAAATTTGCAACGTAAAGAATATTTAGAAGAATTAAGTATGTCATACGATCAATGGAGAGAAATTGATGGATCAGTAACAGAAGCAGATGTAGTCTTAGAGGCTCTTAAACCAAACAAACACCTCATGAAGCTCACCATCAAAGACTATAGAGACAATAGCTTTCCAAATTGGCTTGGGTGTCATCATTTACTCAATTTAGTATCTCTTGAATTGTTGGGATGTAAATTTCCTTCCCATATGCCACCACTTGGGCAGTTCCCCTTTCTCAAGAAGCTTACCATTTCAGGATGTGATGGAATAGAGATCATTGGTACAAAGTTTTATGGCTATAATTCATCAAATGTTCGATTTAGATCCTTTGAAACTTTGCGATTTGAGCACATGTCTGAATGGAAGGAATGGTTATGTCTTGACGGTTTTCCTTTACTTCAAGATCTTTGTATAAAACATTGTCCCAAGTTGAGAAGTGCCCTACCTCAAAACCTTCCTTCATTGCAAAAATTGGAGATCATTGATTGCCAAGAGTTGGAGGCTTCAATTCCCAGGGCTGATAATATCAAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATCTAGAACTGTCATCATTGGATTTTCTTAGTTGTAATTCTCTTCGCACTCTAACTATAACAGAGGAGTGTCTGCTGCCATCATCTATTAACTCTCTAGAGTTGATAAACTGTTCCAACCTAAGAATAATAAACTACAAGGGTCTTCTCCACCTCGCTTCACTTGAATATCTATATATTGAAGACTGCCCTTGTCTTGAGAGCTTGCCAGAGGAGGGTCTACCCAACTCCCTTTCTACCTTGTCCATTAATTAA 2721 0.38 MYNSLQIDTDRVQRKGTIRRFVSGFKIQSEYKVLLQRLDFLAEQKDMFGLQEATTCDNHVWENLSTTTSLVDESFIYGREHEKEEIVHFLLADTDCDKQISIISIVGLGGMGKTALAQLVFNDHRIKEQFEIKAWVSVSQSIGLVSLAQSILKSFQSSAADSQDLEILQHQLQQRLTGKRCLLILDDVWSRNKNMLECLLLPFSHGSSGSKIIVTTRDKEVASIMLSTRLLHLKQLQENDSWSLFVKHAFRGRNVVEYPDLELIGKKIVEKCGGLPLALKTLGSILRTKSSESEWVKILETDLCRNDDNNINPLLRLSYLNLPSNVKRCFAYCSIFPKGYEFDKGGLIKLWMAEGLLKCWGRDNSEEELGNEFFHNLVSISFFQQSVMPTWAGKYYFIIHNIVNELAKSVSGESRLRIESDNVQDIPERTRHIWCCLDLKDGDRKLEHISKIEGLHSLTVEAHGYVDQRFKISTNVQQKLFSRLKYLRMLSFSSCNLLDLADEIGKLKLMCYLDLSYTEIACLPNSICMLYNLQTLLLQDCFKLTELPSDFYKLVNLHHLNLEGTSIKNMPTKIGGLNNLEMLTDFVVGEQHGIDIKQLGKLNQLRGKLRISGLENVIDPADVVAANLQRKEYLEELSMSYDQWREIDGSVTEADVVLEALKPNKHLMKLTIKDYRDNSFPNWLGCHHLLNLVSLELLGCKFPSHMPPLGQFPFLKKLTISGCDGIEIIGTKFYGYNSSNVRFRSFETLRFEHMSEWKEWLCLDGFPLLQDLCIKHCPKLRSALPQNLPSLQKLEIIDCQELEASIPRADNIKLEVEDFFGPNLELSSLDFLSCNSLRTLTITEECLLPSSINSLELINCSNLRIINYKGLLHLASLEYLYIEDCPCLESLPEEGLPNSLSTLSIN 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00364 906 Gene3D - 57 229 IPR027417 -
Tsu03g00364 906 Pfam NB-ARC domain 80 300 IPR002182 GO:0043531
Tsu03g00364 906 Gene3D Ribonuclease Inhibitor 443 810 IPR032675 -
Tsu03g00364 906 Gene3D - 319 410 IPR036388 -
Tsu03g00364 906 SUPERFAMILY L domain-like 400 905 - -
Tsu03g00364 906 Gene3D - 235 318 IPR042197 -
Tsu03g00364 906 PANTHER OS05G0414200 PROTEIN 22 892 - -
Tsu03g00364 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 333 IPR027417 -
Tsu03g00364 906 PRINTS Disease resistance protein signature 272 286 - -
Tsu03g00364 906 PRINTS Disease resistance protein signature 102 117 - -
Tsu03g00364 906 PRINTS Disease resistance protein signature 175 189 - -
Tsu03g00364 906 PRINTS Disease resistance protein signature 786 802 - -
Tsu03g00364 906 PANTHER DISEASE RESISTANCE PROTEIN RP 22 892 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00364 Tsu-Chr3 3122464 3125670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00364 76 729 WRKY Transcription Factor Family AT5G45050 23.395 1.14e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00364 - - mtr:MTR_3g021170 1062.75