Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00362 atgGCAGCAGAGTTTGTTGTTAATCGGGCATTTCTATCGTCTGTGTTTCAAGAGATTCAAGCGAGGTTAGCAAATGTCATAAATTACTTGGATGAAGAGGTGGTGAAAAAGCTTGAAATCACACTGAGTTCTATCAATGACGTGCTGGATGATGCAGAGACAAAGGAGAACCTAAGCCCATCCATAAAGAATTGGCTTGATGAGATCAAACATGAGGTATACGAATTAGAGAAACTATTGGATCTGATTGATACTAATGAGCAACGACGAAAGGGCACAATACGACACTTTGTTTCAGGTTTTATTAATCGATTTGAATATAGGATTGTGATTAAAGAATTGCTACATAGGCTTGAGTTTCTTGCAGAACAAAAGGATATATTAGGACTTCAAGAAGCAACTCGTGATATTCATGACACTCCCATTCGGAATCCAAGTATACCAAGTTCATCTTTGGTGGATGATGCATCTGTCATATTTGGTAGAGAGCATGAGAAAGAGGAAATCGTCGATTTTTTACTTGCAGATAGTGACAATACTGACAAGCAGGTATCCATAATCAGTATAGTGGGTCTGATTGGGATAGGAAAGACTACACTTGCCCAGCTTGTTTATAATGACCACAGGATTATGGAGCAATTCGAAATGAAAGCTTGGGTCCATGTTTCACAATCTTCTAATCTTATTTGTCTAACCCGATCAATTCTCGAGTCATTTAATTCTTCAACACCGGATactaaaaaattagtaataCTCCAATATCAGTTGCAACAGAGGGTAATGGGCAAGAGATATTTGCTTTTTCTAGATGATGTTTGCAACAAAGATGGGAATATGTGGGAGGATTTACTACTTCCTTTCAGCCTTGGATCTTCTAGAAGTAAGGTAATCGTCACAACGCGTGATAACGAAGTAGCATCAATCATGGGATCCACACGGCTACTTCATTTAAAGCAATTGGAGGACTCTGATTCTTGGAGTTTATTTGTGAATTATGCTTTTCGAGGTAGGAATGTCATTGAATATCCAAATCTTGAATCCATAGGCAAGAAAATAGTAGAAAAGACTGGGGGGTTGCCTTTAGCTCTGAAAACATTGGGGAGTATTTTGCGAACAAAATCATCTGAGTCTGAATGGGTCAAGATATTGGAGACTGATTTGTGGTGTTTACCCAACAGTGACAACAACATTAACTCCTTACTGAGATCGAGTTACCTTAACCTTCCTTCCAATCTGAAATGTTGTTTTGCTTATTGTTCTATATTTCCCAACGGTTATGAGTTTGAGAAGAGTGAATTAATCAAGCTTTGGATGGCAGAAGGTTTGCTTAAGTGTTGGGGAAGAGACAAAAGCGAAGAAGAGTTAGGTAATGAATTCTTCAATCATCTAGTGTCAATATCGTTTTTCCGACAATCAGTAATCATGTCATTATGGAATGGTAAGTACTACTTCACCTTGCATGATCATGTCAATGATTTAGCAAAATCAGTGTCAGGTGAATCCTGCTTACGAATAGAGGATGATAACGTGCAAGATATCCATGAAAGGACACGTCACATTTGGTGCTGCCTTGATTCAAAGGACGGTCATAGAAAACTAGAGCGTATTCATAAAACTAAGGGACTACACAGTTTGATGGTAGCAGCACAGGGCTATGGCGACCAACGCTTTAAGATAAGCACCAATGTGCAGCAAAAGTTGTTTTCAAGACTAAAATATTTGCGCATGTTGTCTTTTTCTGGTTGCAATCTCTTAGAGCTAGCTGACACTCTTATTGCAAGATTGTTTTAA 1791 0.3825 MAAEFVVNRAFLSSVFQEIQARLANVINYLDEEVVKKLEITLSSINDVLDDAETKENLSPSIKNWLDEIKHEVYELEKLLDLIDTNEQRRKGTIRHFVSGFINRFEYRIVIKELLHRLEFLAEQKDILGLQEATRDIHDTPIRNPSIPSSSLVDDASVIFGREHEKEEIVDFLLADSDNTDKQVSIISIVGLIGIGKTTLAQLVYNDHRIMEQFEMKAWVHVSQSSNLICLTRSILESFNSSTPDTKKLVILQYQLQQRVMGKRYLLFLDDVCNKDGNMWEDLLLPFSLGSSRSKVIVTTRDNEVASIMGSTRLLHLKQLEDSDSWSLFVNYAFRGRNVIEYPNLESIGKKIVEKTGGLPLALKTLGSILRTKSSESEWVKILETDLWCLPNSDNNINSLLRSSYLNLPSNLKCCFAYCSIFPNGYEFEKSELIKLWMAEGLLKCWGRDKSEEELGNEFFNHLVSISFFRQSVIMSLWNGKYYFTLHDHVNDLAKSVSGESCLRIEDDNVQDIHERTRHIWCCLDSKDGHRKLERIHKTKGLHSLMVAAQGYGDQRFKISTNVQQKLFSRLKYLRMLSFSGCNLLELADTLIARLF 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00362 596 Pfam NB-ARC domain 163 384 IPR002182 GO:0043531
Tsu03g00362 596 Coils Coil 35 55 - -
Tsu03g00362 596 Pfam Rx N-terminal domain 11 94 IPR041118 -
Tsu03g00362 596 PRINTS Disease resistance protein signature 259 273 - -
Tsu03g00362 596 PRINTS Disease resistance protein signature 356 370 - -
Tsu03g00362 596 PRINTS Disease resistance protein signature 186 201 - -
Tsu03g00362 596 PRINTS Disease resistance protein signature 569 585 - -
Tsu03g00362 596 Gene3D - 144 314 IPR027417 -
Tsu03g00362 596 Gene3D - 12 118 - -
Tsu03g00362 596 Gene3D - 405 497 IPR036388 -
Tsu03g00362 596 PANTHER DISEASE RESISTANCE PROTEIN RP 18 585 IPR044974 GO:0006952
Tsu03g00362 596 PANTHER OS05G0414200 PROTEIN 18 585 - -
Tsu03g00362 596 Gene3D - 319 404 IPR042197 -
Tsu03g00362 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 419 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00362 Tsu-Chr3 3111843 3113778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00362 184 378 WRKY Transcription Factor Family AT5G45050 25.628 2.01e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00362 - - mtr:MTR_3g021170 699.123