Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00339 ATGGTTCAAAGAAAGGTTCAAAATAAGCTTAGTATCAATAATATTCAACATGTTAAATCAGAGAAATTTTTAGCAAACATGAaaatttcttcttcatcttcatcacatcatcaaaaccaagatggaaaaaataaagtttctgatatgaagaagaaaatgaagaaatcaaagtCAATAAAAATTTCTGATCTTGAAACTCTTCAAATTCAACAATCAACACCACCTTCATCAGTTTCACCAAATTACATGAAACCCACAAGTAGTTCACAATCAAAAAAGGAACTTTTTCGTGTGAGTCTTAGAAAAAATCAATCTTGTTCTGTTATTGAGAATCTTGATAGAAAATTTTCAAGTGATTCAAAAGCTATGTGTAAAAAACCTAGTTTGAGTTTGGTTAGAACATTAACAAAAACTACTAGTTTTAAAGGTTGTAGAAATTTTCCTAGAAAATCAACAAGAGCTACTTGTTCTTCAACTTTGAAAGATGCAAAATTTCCTTCATATCTTAAGCTAAATCCTGGTGGAACTGAGTTAGAAGGAAGTTCAGTTATGAGGGTTTGTTCATATAGTTATTGTTCTCTTAATGGTCACCATCATCATAATCATGGCGATTTGCCTCCTTTGAAGACGTTTATGTCTTCGAGGAGGCGTGTTTTGAAGAGGGTGAAGCTTGAAGCGTTGAGTCCTCGAAGTCGAAGATTGAAGGTGGTGGGTGAGGTGGAAAAGAAGGACTGTGATGTTGAGCATAATGTGTTTGATGAAAAGCCTGAGTATGATGAAATTGGCATGGATTTCTTCATTGAAATATATGCTGATGAAAAAAAGGATGCAAAATCGAAAGGTGAAGAAGAAATTGGGAAAACTGACTTTCTCGAAGACGTTGTTGATCATGAAGATGTAATCAAGTCTACAGTTGAAGATGATGGCATAGAAGCAGATTTTCTGAAAGATGTTGAGGATCAAGAGAAAAATGAAGTTGCAGGTGAAGATCAACAAACTAGTTGGTCTCATGAAGAAATGAGTATCGAAGGTGTTCACAATAACATGgatgattctgattcggaagccAGTAATATGGAGTGTGACGAGGAACAATTTTACGGATTTGATCATGAACATGAGGCAGATTCTTCTGTTTACACAGATGAGGAAAATGATTCAAAATCTGACTCCTCTTCTCAGAGTTCTCATGATGTGTCGGTAACATGGTTAGATGATATTCTTAGCAGCTATTATGATGACATTATTTTGGTCGATGAAACACTCAAAGAAGGCAAATCAGAAGAAAGCATCTATCTGGAAGAACAACATCATGATGAAAAAAGTGGAAGCAATGAGACTCAAGAAATTGGTTACCCCTGCAGTGATGTCGGTTGCGACCGATCTTCTTTGGCAGATGAAATATTTGATTACCTGATAAACGCCGAAGAAATTGTTGATGAGACTAGCCAAGAGAGCACAGATGATAACATCAATAAAGTGAAGAGCCAAATTCAACCGTCTCCGAGTGGATTTGAATTCTGTACCTTGAGGCCAACAGACCAAACTCTTAACTCTGATCTGACACCTGATGAACAGAAGAGCCAGATTCAATTATTTGACGTGGTTGAAGAAAGAACCAAAGGTATTCAATATCATGGCAAATGTAATAAAAGAACAAGTCGCGTAGTtgatgaagaggaagaggaaaaCACAAGAGAGAATTGGAAAGGTGTAATTAGGAGAAAGAGGTGtgttgaagaggatgatgatgaaatgAGGAAATTCAATCCAAGAGATCCAAATTTTTTGCCTTTGGTTcctgaaaaagaaaaggaaaaggttGATTTGAGGCATCAAATGATGGATGAGAGAAAAAATGCAGAGGATTGGATGGTTGATTGTGCACTAAGACAAGTTGTTAACAAGCTAGCTCCTGCTAGGAAGAAGAAGGTTGCATTGCTAGTTGAAGCATTTGAAACTGTTATACCTAAATCTGAATCTCAGTTGAGAAACAAATCAGGGTTTGCTCATGCTAGACACATTCAAGCTTGCAGCTGA 2040 0.3333 MVQRKVQNKLSINNIQHVKSEKFLANMKISSSSSSHHQNQDGKNKVSDMKKKMKKSKSIKISDLETLQIQQSTPPSSVSPNYMKPTSSSQSKKELFRVSLRKNQSCSVIENLDRKFSSDSKAMCKKPSLSLVRTLTKTTSFKGCRNFPRKSTRATCSSTLKDAKFPSYLKLNPGGTELEGSSVMRVCSYSYCSLNGHHHHNHGDLPPLKTFMSSRRRVLKRVKLEALSPRSRRLKVVGEVEKKDCDVEHNVFDEKPEYDEIGMDFFIEIYADEKKDAKSKGEEEIGKTDFLEDVVDHEDVIKSTVEDDGIEADFLKDVEDQEKNEVAGEDQQTSWSHEEMSIEGVHNNMDDSDSEASNMECDEEQFYGFDHEHEADSSVYTDEENDSKSDSSSQSSHDVSVTWLDDILSSYYDDIILVDETLKEGKSEESIYLEEQHHDEKSGSNETQEIGYPCSDVGCDRSSLADEIFDYLINAEEIVDETSQESTDDNINKVKSQIQPSPSGFEFCTLRPTDQTLNSDLTPDEQKSQIQLFDVVEERTKGIQYHGKCNKRTSRVVDEEEEENTRENWKGVIRRKRCVEEDDDEMRKFNPRDPNFLPLVPEKEKEKVDLRHQMMDERKNAEDWMVDCALRQVVNKLAPARKKKVALLVEAFETVIPKSESQLRNKSGFAHARHIQACS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00339 679 MobiDBLite consensus disorder prediction 29 95 - -
Tsu03g00339 679 MobiDBLite consensus disorder prediction 376 391 - -
Tsu03g00339 679 MobiDBLite consensus disorder prediction 62 95 - -
Tsu03g00339 679 SMART CaM_binding_2 545 657 IPR012417 GO:0005516
Tsu03g00339 679 MobiDBLite consensus disorder prediction 376 398 - -
Tsu03g00339 679 Pfam Plant calmodulin-binding domain 550 657 IPR012417 GO:0005516
Tsu03g00339 679 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 495 IPR044681 GO:0005516
Tsu03g00339 679 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 543 679 IPR044681 GO:0005516
Tsu03g00339 679 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 495 - -
Tsu03g00339 679 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 543 679 - -
Tsu03g00339 679 MobiDBLite consensus disorder prediction 316 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00339 Tsu-Chr3 2843968 2847192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00339 560 679 Calmodulin-binding Proteins AT2G38800 51.667 1.15e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00339 - - cam:101515669 698.353