Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00331 ATGGAGAACCATAATAAGGTGCTAATGTTATTGGTGTGTAATTTCTTCTTTTGCTCCATGCCAACTTACTCTATTCAGCACACTCTTACTCCAAATCAGTTTATCCAATACAATGATACCCTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGTTTTTTCAACTTTGGAGATCCACAACTACAATACTTTGGTATATGGTACAAGAGCATATTACCTAGGACTATTGTGTGGATTGCCAATAGAAACACGCCTGCACAAAACTCAACAACATTGATGAAACTTACTGATCAAGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGCATTATCTGGAACTCCAATTCATCAAGAATTGGAGTGAAGCCAGTTGTTCAGCTTTTGGATTCAGGTAATCTTGTTCTGAAAGATGGAAACAACACTCAGGACTTTTTGTGGGAAAGTTTTGATTATCCCGGTAACACTTTCCTTGCTGGAATGAAGCTGAAAAGTAATTTAGTTACTGGTCCATATAAATATCTCACATCATGGAGAAACCCTGAAGATCCTGCTGAAGGCGAGTTTTCATTTAAGATTGATTCACATGGTTATCTTCAACAGGTTACTGAAAACGGAGCAAGAATTCTGTATAGAGGAGGGTCATGGAATGGAAATATTTTCACTGGTGTTGCTTGGCAAAGAAATAATAGAATCTTGAATTTCTCAGTAGTGTTCACTGACAAAGAAGTCTCTTATCAATATGAAACTTTGATGAATTCAATTATAACTAGATTGGTGCTAGATCCAACTGGAAATACACAACGTTTTCTATGGtcaaataagaaacaaatttggGAGGTTATAGCTACTAGTCCTTCAGACCAGTGTGACGAATATGCCTTGTGTGGTATCAACTCTAACTGCAATATAAATGACTTTCCAATATGTGAATGCTTGGATGGATTCATgccaaaatttcaaacaaaatggAAGTCATCGAGTTGGTCTGATGGGTGTGTAAGGAAAACACCTTTAAATTGTCTCCATGGAGATGGATTTTTACCGTACACAAACATGAAGTTACCAGATACGTCAGCATCGTGGTTTAACAGGAGCATGACCCTTGAGGAATGTAAGACAATGTGTTTGAAAAAATGTTCTTGCACTGCATATGCAAATTTAGATGTCAGAAATGGTGGTAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGATATGAGAAAACATCCGGGCATAGGACAAGACATTTACATACGACTCGCGTCTTCAGAACTTGATCAGAAAAAGAATAAGAGGAACTTGAAGCTTGCTGGGACTCTAGCAGCGGTTATTGCATTCATTATAGGACTAACTGTTCTTGTATTGGTCAAATCAGCATATAGAAAGAAGCTTGGAAAACAAGCTTTTATAAAAAGGTTATTTTACTGGAAGCACAATAAGGAGAAGGAAGATGGTCACTTGGcaacaatatttgatttttcaacCATCACTATTGCAACAAATCACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATAATGGTAGATGGCCAAGAGATTGCTGTTAAAAAGCTTTCTAAAACATCGGGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGACAAGTTGTTAATCTACGAATTCATGCCCAACAGAAGCTTGGACTGCTTTATTTTTGATCCTACGCGAAGTAAATCACTAGATTGGACAAAGCGCTTAGAAATTGTTGATGGGATTGCTCGGGGGCTGCTATATCTGCATCAGGATTCTAGACTAAGAATCATACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATATCCGATTTCGGTTTAGCAAGATCATTTATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTCATGGGAACATATGGATATATGCCTCCTGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGTAAGAAGAATAGTGGATTTTGTGACCCTCGACATCGTCTAAACCTTCTAGGGCATGCATGGAGATTATGGATTGAAGGAAAGCCTGAGGAGTTAATAGCTGACATATTATATGATGAGGCCATATATTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGCAACCAGAAGATAGGCCTAACATGTCTTCTGTGGTGTTTATGTTAAAGGGTGGAATGTTACTCCCCAATCCAAGTGAACCTGGTTTCTATGCAGGAAGAAATAATACAAATAGCACAGGATCTTCTTCAAACGGGTTTTCAATAAACGAAGCTTCAATCTCATTATTAGAGGCCCGATAG 2454 0.3712 MENHNKVLMLLVCNFFFCSMPTYSIQHTLTPNQFIQYNDTLVSAAGTFEAGFFNFGDPQLQYFGIWYKSILPRTIVWIANRNTPAQNSTTLMKLTDQGSLVILDGSKGIIWNSNSSRIGVKPVVQLLDSGNLVLKDGNNTQDFLWESFDYPGNTFLAGMKLKSNLVTGPYKYLTSWRNPEDPAEGEFSFKIDSHGYLQQVTENGARILYRGGSWNGNIFTGVAWQRNNRILNFSVVFTDKEVSYQYETLMNSIITRLVLDPTGNTQRFLWSNKKQIWEVIATSPSDQCDEYALCGINSNCNINDFPICECLDGFMPKFQTKWKSSSWSDGCVRKTPLNCLHGDGFLPYTNMKLPDTSASWFNRSMTLEECKTMCLKKCSCTAYANLDVRNGGSGCLLWFDNIVDMRKHPGIGQDIYIRLASSELDQKKNKRNLKLAGTLAAVIAFIIGLTVLVLVKSAYRKKLGKQAFIKRLFYWKHNKEKEDGHLATIFDFSTITIATNHFSNRNKLGEGGFGPVYKGIMVDGQEIAVKKLSKTSGQGIEEFKNEVKLMATLQHRNLVKLLGCSIQQDDKLLIYEFMPNRSLDCFIFDPTRSKSLDWTKRLEIVDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRHRLNLLGHAWRLWIEGKPEELIADILYDEAIYSEIIRFIHVGLLCVQQQPEDRPNMSSVVFMLKGGMLLPNPSEPGFYAGRNNTNSTGSSSNGFSINEASISLLEAR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00331 817 CDD STKc_IRAK 508 775 - -
Tsu03g00331 817 Gene3D Transferase(Phosphotransferase) domain 1 578 778 - -
Tsu03g00331 817 CDD B_lectin 38 151 IPR001480 -
Tsu03g00331 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Tsu03g00331 817 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Tsu03g00331 817 CDD PAN_AP_plant 335 420 - -
Tsu03g00331 817 SMART ntp_6 340 419 IPR003609 -
Tsu03g00331 817 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Tsu03g00331 817 SMART serkin_6 502 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00331 817 Pfam PAN-like domain 339 405 IPR003609 -
Tsu03g00331 817 Pfam D-mannose binding lectin 74 177 IPR001480 -
Tsu03g00331 817 SUPERFAMILY Protein kinase-like (PK-like) 486 773 IPR011009 -
Tsu03g00331 817 Pfam Protein tyrosine and serine/threonine kinase 505 770 IPR001245 GO:0004672|GO:0006468
Tsu03g00331 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 182 IPR036426 -
Tsu03g00331 817 Gene3D - 22 148 IPR036426 -
Tsu03g00331 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 817 - -
Tsu03g00331 817 SMART blect_4 32 151 IPR001480 -
Tsu03g00331 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Tsu03g00331 817 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Tsu03g00331 817 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Tsu03g00331 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 817 - -
Tsu03g00331 817 Gene3D Hepatocyte Growth Factor 337 412 - -
Tsu03g00331 817 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00331 Tsu-Chr3 2761197 2764569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00331 442 787 Receptor kinase-like Gene Family AT4G23230 53.846 3.78e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g00331 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00331 - - gmx:100819820 1159.82