Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00329 ATGGAGAACCATAACAAGGTGTTAATGCTAATGGTGTGTACTTTCTTCTTTTGCTCAATTCCCACTTTCTCTATTCAGAATACTCTTACTCCGAATCAGTTTATCCAATACAATGATACCCTTGTTTCTGAGGCTGGAACCTTTGAAGCAGGATTTTTCAACTTTAAAGATTCACAACACCAATACTTTGGTATATGGTACAAGAAAATATCACCAAGGACTATTGTGTGGGTTGCCAATAGAGACACGCCAGTACAAAACTCAACAGCAATGATGAAACTTACTGATGATGGAAGTCTTGTTATTCTTGATGGCTCCAAAGGCATTATCTGGAACTCCAATTCATCAAGAATTGGAGTGAAACCAGTTGTTCATCTTTTGGATTCAGGTAATCTTGTTCTGAAAGATGGAAACAACACTCAGGACTTTTTGTGGGAAAGTTTTGATAATCCCGGTAACACTTTCCTTGTCGGAATGCAGCTGAAAAGTAATTTAGTTACCGGTCCATATAGATATCTCACATCTTGGAGAAGCCACGAAGATCCTGCTGCAGGCGAGTTTTCGTATAGGATAGATACACATGGTTATCCTCAGCAGGTTACTGGAAAGGGAACAAGAATTCTGTATAGAGCAGGGTCATGGAATGGAATTCTTTTCACTGGTGTTTCTTGGCGAAGAAAGCATAAAATCTTGAATTTCTCAGTAGTGTTCACTAACAAAGAATTCTCTTATCAATGTGAAAGTCTGAAGAACTCAATTATTACTATTATGGTGCTAGATCCATACGGCACTTCACAACGTTATATATGGTCAGATAGGACACAAATTTGGGAGGCTATATCTTCGCGTCCTGCAGACCAGTGTGATGATTATGCCTTGTGTGGTATCAACTCTAACTGCAATATCAATGGATTTCCAATATGTGAATGCTTAGAAGGTTTCATgccaaaatttcaaacaaaatggAAGTCATCGAATTGGTCTGATGGGTGTGTAAGGAAAACACCTTTAAATTGTCTCCACAGAGATGGATTTTTACAGTACACAAACATGAAGCTGCCAGATACATCAGCATCATGGTTTGACAAGAGCATGAACCTTGAGGAATGTAACACAATGTGTTTGAAAAAATGTTCGTGCACTGCATATGCAAATTTAGATATCAGAGATGGAGGGAGTGGCTGCTTACTTTGGTTTGACAACATTGTAGACATGAGAATACATCCAGATGTAGGACAAGACATTTACATACGGCTGGCATCTTCAGAATTTGGTCATAAAAAGAGTAAGAGCAACTTGAAGCGTAATGGGATTCTGGCAGGAGTTATTGCTTTGATTATTGGACTAATCGTTCTTGTATTGGTGACATCAGTGTCTATAAAGAAGCTTGggtgtataaaaaatatatttaaccggAAGTACGAGAAGGAGAAGGAAGATGGTGACTTGGTAACGATATTTGATTTTTCGACAATCACTAATGCAACAAATAACTTCTCTAACAGAAACAAGTTAGGACAAGGTGGTTTTGGACCAGTTTACAAGGGCATACTGGTGGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAACTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTCCAACACCGAAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTATGAATTCATGCCCAACAAAAGCTTGGACTactttatttttgATACTACACGAAGTAAATTACTAGATTGGACAAAGCGCTTGGAAATTGTTGATGGGATTGCTCGGGGGCTGCTGTATCTGCATCAGGATTCTAGACTCAGAATCATACATAGAGATCTAAAGACAAGCAATATACTTCTTGATATAGATATGATCCCAAAGATAGCAGATTTTGGTTTAGCCAGATCATTTATGGGAGACCAAGCTGAAGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAAGAAGAATCGAGGATTTTGTGACCCTGTACATCATCTAAACCTTCTTGGTCATGCATGGAGATTATGGATTGAAGAAAAGCCAGAGGAGTTAATAGCCGACATATTATATGATGAGGCGATATGTTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGTGTACAACAGCAACCAGAAAATAGGCCTAACATGTCATCTGTGGTCTTTATGTTAAAGGGTGAAAAGTTACTCCCTAGTCCAAGTGAACCTGGGTTCTATGCAGGAAGAAATAATACAAATAGCACAGGATCTTCTTCAAATGGGTGTTCAATAAATGAAGCTTCAATCTCATTGTTAGAGGCCCGATAG 2445 0.3751 MENHNKVLMLMVCTFFFCSIPTFSIQNTLTPNQFIQYNDTLVSEAGTFEAGFFNFKDSQHQYFGIWYKKISPRTIVWVANRDTPVQNSTAMMKLTDDGSLVILDGSKGIIWNSNSSRIGVKPVVHLLDSGNLVLKDGNNTQDFLWESFDNPGNTFLVGMQLKSNLVTGPYRYLTSWRSHEDPAAGEFSYRIDTHGYPQQVTGKGTRILYRAGSWNGILFTGVSWRRKHKILNFSVVFTNKEFSYQCESLKNSIITIMVLDPYGTSQRYIWSDRTQIWEAISSRPADQCDDYALCGINSNCNINGFPICECLEGFMPKFQTKWKSSNWSDGCVRKTPLNCLHRDGFLQYTNMKLPDTSASWFDKSMNLEECNTMCLKKCSCTAYANLDIRDGGSGCLLWFDNIVDMRIHPDVGQDIYIRLASSEFGHKKSKSNLKRNGILAGVIALIIGLIVLVLVTSVSIKKLGCIKNIFNRKYEKEKEDGDLVTIFDFSTITNATNNFSNRNKLGQGGFGPVYKGILVDGQEIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNKSLDYFIFDTTRSKLLDWTKRLEIVDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMIPKIADFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNRGFCDPVHHLNLLGHAWRLWIEEKPEELIADILYDEAICSEIIRFIHVGLLCVQQQPENRPNMSSVVFMLKGEKLLPSPSEPGFYAGRNNTNSTGSSSNGCSINEASISLLEAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00329 814 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Tsu03g00329 814 CDD STKc_IRAK 505 772 - -
Tsu03g00329 814 Gene3D - 22 149 IPR036426 -
Tsu03g00329 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tsu03g00329 814 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Tsu03g00329 814 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 814 - -
Tsu03g00329 814 CDD PAN_AP_plant 335 420 - -
Tsu03g00329 814 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Tsu03g00329 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 182 IPR036426 -
Tsu03g00329 814 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Tsu03g00329 814 SMART serkin_6 499 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00329 814 SMART ntp_6 340 419 IPR003609 -
Tsu03g00329 814 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 814 - -
Tsu03g00329 814 SMART blect_4 32 151 IPR001480 -
Tsu03g00329 814 SUPERFAMILY Protein kinase-like (PK-like) 483 770 IPR011009 -
Tsu03g00329 814 Gene3D Hepatocyte Growth Factor 337 419 - -
Tsu03g00329 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Tsu03g00329 814 Pfam PAN-like domain 339 405 IPR003609 -
Tsu03g00329 814 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Tsu03g00329 814 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Tsu03g00329 814 Pfam D-mannose binding lectin 74 177 IPR001480 -
Tsu03g00329 814 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00329 814 CDD B_lectin 27 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00329 Tsu-Chr3 2702237 2749110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00329 445 784 Receptor kinase-like Gene Family AT4G23230 54.624 1.55e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g00329 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00329 - - gmx:100803275 1042.34