Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00328 ATGGAGAACCATAATAAGGTGCTAATGCTACTGGTGTGTACTTTCTTCTTATGCTCCAAGCCCACTTTCTCTAAACAGAAGAACACTCTTACTCCAAATCAGTTTATCCAATATGGTGATACACTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGATTTTTCAAATCTGGAGATCCACCACGTCAATACTTCGGTATATGGTACAAGAGCATATCACCAAGGACTATTGTGTGGGTTGCCAATAGAAATACCGCTGCACAAAACTCAACAGCAATGTTGAAACTCAATGATCAGGGAACTCTTTTTCTTATTGATGGCGCCAAAGGCATTATCTGGTCCTCCAATTCATCCAGAATTGGAGTGAGACCAATTGTTCAGCTTTTGGATTCAGGAAATCTTGTTTTGAAAGATCGAAACAGAAGCAGTGAGAATGAGGAATTGTTGTGGGAAAGCTTTGATTATCCCAGTGACACAATGCTTTCTGGAATGAAGATGAAAAGTAACTTAGTTACTGGTCCATATAGATATCTCACTTCTTGGAGGACCCATGATGATCCTTCTGTAGGTGAGTTTTCGTATAGGATAGATACTCGTGGTTTCCCTCAACAGGTTATTGCACAAGGCAAAACAATTCTGTATAGAGGAGGTTCATGGAATGGATATCATTTCACTGGAGTTTCTTGGCAAAGACTTCATAGTCTCTTCAATTTCTCCTTTCTGTTAACCGACAAAGAAGTCACTTATCAATATGAAACACTGAACAGTTCAATTATTGCTAGATTTGTGCTAGATCCATATGGAAGTCCACAACGTTTTACATGGTCGGATCAGACACAAAATTGGGAGGCTATCGCTACTCGTCCGTTAGACCAGTGTGAACATTATTCCTGGTGTAGTATCAACTCTAACTGCAATACTAATGAATTTCCGATATGTGAATGCTTGGAAGGTTTCATgccaaaatttcaaacaaaatggAAGTCATCGGATTGGTCTGGCGGGTGTCTGAGGAGAACAAAATTGAATTGTCTTAATGGAGATGGCTTTTTGAAGTACACGAGCATGAAGTTGCCAGACACGTCATCATCTTGGTATGACAAGAGATTGAGCCTTGAGGAGTGCAAGAGAGTGTGTTTAAAAAACTGTTCTTGCACTGCGTATGCAAATTTAGATATCAGAAATGGAGGGAGTGGTTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAAAACATCCAGACCAAGGACAAGACATTTACATACGACTCGCATCTTCAGAAATTGatcataaaaagaaaaggaggaACAAGAAGCACACTTGGACTCTTGCAGGAATTATTGCATTCGTTATAGGACTAACTGTTCTTATATCAGTCACATCAGCATCTAGAAAGAAGATTGGTAAGCCAGggtatataaaaaagttatttcacTGGAAGCACAAGACGGAGATGGAAGATGGTGACTTGGCAACAGTATTTGATTTTTCGACCATCACTAATGCAACAAATAACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCGTGATAGAAGATGGCCGAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCCGGACAAGGAATTGAGCAGTTCAAAAATGAAGTGAAGTTGATGGCAACACTTCAACACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGACTACTTTACTTTTGATACAACACGAAGTAAATTACTAGATTGGACAAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGTCTGCTGTATCTGCATCAGGATTCTAGACTCAGAATTGTACATAGAGATCTCAAGACAAGCAATATTCTTCTTGATATTGATATGATCCCAAAGATAGCAGATTTTGGGTTAGCCAGATCATTTATTGGAGACCAAGCTGAAGCTAATACAAATAGAGTGATGGGAACATaTGGATATATGTCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTCGTTGTACTTGAGATAATTAGCGGTAGGAAGAATCGTGGATTTTGTGACCCTGTACATCATCTAAACCTTCTTGGTCATGCATGGAGACTGTGGACTGAAGACAAGGCAAAGGAGTTAATAGCTGACATATTATACGATGAGGCGATATGttcaaaaataataagattTATTCATATTGGTCTATTGTGTGTACAACAGAAACCAGAAAATAGGCCTAACATGTCATCTGTGGTTTTTATGTTAAATGGTGAAAATTTACTTCCCAAACCAAGTGAACCCGGATTCTATGCAGGAAGTGATAATACAAATAGCATAGGATCTTCTTCAAAAGTGTGTTCAATAAATGAAGCTTCACACTCATTGTTAGAGGGCCGATAG 2466 0.3808 MENHNKVLMLLVCTFFLCSKPTFSKQKNTLTPNQFIQYGDTLVSAAGTFEAGFFKSGDPPRQYFGIWYKSISPRTIVWVANRNTAAQNSTAMLKLNDQGTLFLIDGAKGIIWSSNSSRIGVRPIVQLLDSGNLVLKDRNRSSENEELLWESFDYPSDTMLSGMKMKSNLVTGPYRYLTSWRTHDDPSVGEFSYRIDTRGFPQQVIAQGKTILYRGGSWNGYHFTGVSWQRLHSLFNFSFLLTDKEVTYQYETLNSSIIARFVLDPYGSPQRFTWSDQTQNWEAIATRPLDQCEHYSWCSINSNCNTNEFPICECLEGFMPKFQTKWKSSDWSGGCLRRTKLNCLNGDGFLKYTSMKLPDTSSSWYDKRLSLEECKRVCLKNCSCTAYANLDIRNGGSGCLLWFDNIVDMRKHPDQGQDIYIRLASSEIDHKKKRRNKKHTWTLAGIIAFVIGLTVLISVTSASRKKIGKPGYIKKLFHWKHKTEMEDGDLATVFDFSTITNATNNFSNRNKLGEGGFGPVYKGVIEDGREIAVKRLSKTSGQGIEQFKNEVKLMATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFTFDTTRSKLLDWTKRLEIIDGIARGLLYLHQDSRLRIVHRDLKTSNILLDIDMIPKIADFGLARSFIGDQAEANTNRVMGTYGYMSPEYAVHGSFSIKSDVFSFGVVVLEIISGRKNRGFCDPVHHLNLLGHAWRLWTEDKAKELIADILYDEAICSKIIRFIHIGLLCVQQKPENRPNMSSVVFMLNGENLLPKPSEPGFYAGSDNTNSIGSSSKVCSINEASHSLLEGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00328 821 ProSiteProfiles BCL2-like apoptosis inhibitors family profile. 219 283 IPR002475 -
Tsu03g00328 821 SMART serkin_6 506 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00328 821 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Tsu03g00328 821 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 19 797 - -
Tsu03g00328 821 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00328 821 CDD B_lectin 28 155 IPR001480 -
Tsu03g00328 821 Pfam D-mannose binding lectin 75 181 IPR001480 -
Tsu03g00328 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 797 - -
Tsu03g00328 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Tsu03g00328 821 SMART ntp_6 344 423 IPR003609 -
Tsu03g00328 821 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Tsu03g00328 821 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Tsu03g00328 821 Pfam PAN-like domain 343 409 IPR003609 -
Tsu03g00328 821 CDD STKc_IRAK 512 779 - -
Tsu03g00328 821 Gene3D - 22 152 IPR036426 -
Tsu03g00328 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 186 IPR036426 -
Tsu03g00328 821 Pfam Protein tyrosine and serine/threonine kinase 509 774 IPR001245 GO:0004672|GO:0006468
Tsu03g00328 821 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Tsu03g00328 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Tsu03g00328 821 Gene3D Phosphorylase Kinase; domain 1 479 581 - -
Tsu03g00328 821 SMART blect_4 33 155 IPR001480 -
Tsu03g00328 821 Gene3D Hepatocyte Growth Factor 340 425 - -
Tsu03g00328 821 SUPERFAMILY Protein kinase-like (PK-like) 489 777 IPR011009 -
Tsu03g00328 821 CDD PAN_AP_plant 339 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00328 Tsu-Chr3 2697174 2700725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00328 450 791 Receptor kinase-like Gene Family AT4G23230 53.026 3.97e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g00328 PK_Tyr_Ser-Thr 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00328 - - gmx:100819820 1160.21