Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00327 ATGGAAAACCATAATAAGGTGCTAGTGCTAATAGTGTGTACTTTCTTCTTTTGCTCCATGCCTACTTACTCTATTCAGCACACTCTTACTACAAATCAGTTTATACAATACAATGATACACTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGTTTTTTCAACTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAGAACATATCACCAAGGACTATTGTGTGGGTTGCTAATAGAGACACGCCAGCACAAAACTCAACGGCAATGATGAAACTTACTGATCAAGGAAGTCTTGTAATTCTTGATGGCTCCAAAGGTATTATCTGGAACTCCAATTCATCAAGAATTGAAGTGAAACCAGTTGTTCAGCTTTTGGATTCGGGAAATCTTGTTCTGAAAGATGCAAGCAGCACTCAGAACTTTTTGTGGGAAAGTTTTGATTATCCCGGTAACACTTTCCTTGCTGGAATGCAGCTGAAAACTAATTTAGTTAGTGGTCCATATAGATATCTCACATCTTGGAGAAGCCCCGAAGATCCTGCTGCAGGCGAGTTTTCATATAGGATAGATACACATGGTTATCCTCAACAGGTTACTGCAAAGGGAGCAACAGTTCTGTATAGAGGAGGATCATGGAATGGAATTCTTTTCACTGGTGTTTCTTGGCTAAGAAAGCATAGAATCTTGAATTTTTCAGTGGTGTTCACTGACAAAGAATTCTCTTATCAATATGAAAGTCTGAACAATTCAATTATTACTAGAATGGTGTTAGATCCATACGGAACTTCACAACGTTTTATATGGTCAGATAGGACACAAATTTGGGAATCTATATCTTCTCGTCCTGCAGACCAGTGCGATGTTTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGAATTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTTCCACCAAAGTGGGAATCATCAAATTGGTCTGATGGGTGTGTAAGGAAAACAGATTTAAATTGTCTCCATGGAGATGGATTTTTACCGTACACAAACATGAAGTTGCCAGATACGTCAACATCCTGGTTTGACAAGAGCATGACCCTTGAGGAATGTAAGACAATGTGTTTAAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATATCAGAGATGGTGGGAGTGGCTGCTTACTTTGGTTTGACAACATTGTGGACATGAGAATACACCCAGATCAAGGACAAGAAATTTACATACGGCTGGCATCCTCAGAACTTGATCATAGAAAGAATACGAGGAACATCAAGCGTGCTGGGATTCTTGCAGGAGTTATTGCATTGATTATAGGACTAACTGTTCTTGTATTGGTCACATCAGTATATAGAAAAAAGCTTGGatgtataaaaaagttatttcacaagaaggagaaggaagatGGTGACTCGGCtacaatatttgatttttcaacCATCACTATTGCAACAAATCACTTTTCTAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCATAATTGAAGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAATACAAGGAGTTGAGGAATTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGAAACCTTGTAAAACTTCTTGGTTGTTCTATTCGACAAGATGAAAAGTTGTTGATCTACGAATTCATGCCCAACAGAAGCTTGGATTactttatttttgATACCATGAGAAGCAAATTGCTAGATTGGACAAATCGCTTGGAAATTATTGACGGGATTGCTCGGGGGCTACTTTATCTGCATCAAGATTCTAGACTTCGAATCATACATAGAGATCTCAAGACTAGCAATATTCTTCTTGATATTGACATGGTCCCAAAGATATCAGATTTTGGTTTAGCGAGATCATTCATGGGAGACCAAGCTGAGGCTAATACAAATAGAGTGATGGGAACATATGGATATATGCCACCAGAATATGCAGTGCATGGATCTTTCTCAATAAAGTCTGATGTTTTTAGTTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGTAAGAAGAATAGCGGATTTTGTGACCCTCGACGTCGTCTAAACCTTCTAGGACACGCATGGAGACTGTGGATTGAAGAAAGGCCAGAGGAGTTAATAGCTGACATATTATACGATGAGGCCATATGTTCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGCGTACAACAGCTACCAGAAAATAGGCCTAATATGTCATCTGTGGTCCTTATGTTAAAGGGTGAAAAGTTACTCCCCAAACCAAGTGAACCCGGGTTCTATGCAGGAAAAAATTATACGAATAGCACAGGATCTTCAATAAATGAAGCTACAATCTCATTGTTAGAGGCCAGATAG 2421 0.3784 MENHNKVLVLIVCTFFFCSMPTYSIQHTLTTNQFIQYNDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKNISPRTIVWVANRDTPAQNSTAMMKLTDQGSLVILDGSKGIIWNSNSSRIEVKPVVQLLDSGNLVLKDASSTQNFLWESFDYPGNTFLAGMQLKTNLVSGPYRYLTSWRSPEDPAAGEFSYRIDTHGYPQQVTAKGATVLYRGGSWNGILFTGVSWLRKHRILNFSVVFTDKEFSYQYESLNNSIITRMVLDPYGTSQRFIWSDRTQIWESISSRPADQCDVYALCGINSNCNINEFPICECLEGFMPKFPPKWESSNWSDGCVRKTDLNCLHGDGFLPYTNMKLPDTSTSWFDKSMTLEECKTMCLKNCSCTAYANLDIRDGGSGCLLWFDNIVDMRIHPDQGQEIYIRLASSELDHRKNTRNIKRAGILAGVIALIIGLTVLVLVTSVYRKKLGCIKKLFHKKEKEDGDSATIFDFSTITIATNHFSNRNKLGEGGFGPVYKGIIEDGQEIAVKRLSKTSIQGVEEFKNEVKLMATLQHRNLVKLLGCSIRQDEKLLIYEFMPNRSLDYFIFDTMRSKLLDWTNRLEIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDIDMVPKISDFGLARSFMGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGKKNSGFCDPRRRLNLLGHAWRLWIEERPEELIADILYDEAICSEIIRFIHVGLLCVQQLPENRPNMSSVVLMLKGEKLLPKPSEPGFYAGKNYTNSTGSSINEATISLLEAR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00327 806 CDD B_lectin 38 151 IPR001480 -
Tsu03g00327 806 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00327 806 SMART ntp_6 340 419 IPR003609 -
Tsu03g00327 806 Pfam D-mannose binding lectin 74 177 IPR001480 -
Tsu03g00327 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Tsu03g00327 806 CDD STKc_IRAK 502 769 - -
Tsu03g00327 806 Pfam Protein tyrosine and serine/threonine kinase 499 718 IPR001245 GO:0004672|GO:0006468
Tsu03g00327 806 SMART blect_4 32 151 IPR001480 -
Tsu03g00327 806 Pfam PAN-like domain 339 405 IPR003609 -
Tsu03g00327 806 Gene3D Transferase(Phosphotransferase) domain 1 572 774 - -
Tsu03g00327 806 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Tsu03g00327 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 182 IPR036426 -
Tsu03g00327 806 CDD PAN_AP_plant 335 420 - -
Tsu03g00327 806 SUPERFAMILY Protein kinase-like (PK-like) 481 767 IPR011009 -
Tsu03g00327 806 Gene3D - 22 148 IPR036426 -
Tsu03g00327 806 SMART serkin_6 496 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00327 806 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Tsu03g00327 806 Gene3D Hepatocyte Growth Factor 336 422 - -
Tsu03g00327 806 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 806 - -
Tsu03g00327 806 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Tsu03g00327 806 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 806 - -
Tsu03g00327 806 Gene3D Phosphorylase Kinase; domain 1 469 571 - -
Tsu03g00327 806 PIRSF SRK 1 806 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00327 Tsu-Chr3 2687520 2695467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00327 445 781 Receptor kinase-like Gene Family AT4G23230 53.143 3.38e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g00327 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00327 - - gmx:100819820 1155.97