Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00326 atgAAGAACCATAATAAGGTGCTAATGCTAATGCTATGTACTTCCTTCTTTTGCTCCATGCCTATTTACTCTATTCAGAACACTCTTACTTCAAATCAGTTTATCCAATACAATGATACCCTTGTTTCTGCAGCTGGAACCTTTGAAGCAGGTTTTTTCAACTTTGGAGATCCACAACGCCAATACTTTGGTATATGGTACAAGAACATATCACCAAGGACTATTGTGTGGGTTGCCAATAGAAACACGCCAGCACAAAACTCAACAGCAATGATGAAACTTGCTGATCAAGGAAGTCTTGTTCTTCTTGATGGCTCCAAAGGCATTATCTGGAATTCCAATTCATCAAGAATTGGAGTGAAACCAGTTGTTCAGCTTTTGGATTCAGGAAATCTTGTTCTAAAAGATGCAAACAGCGCTAAAAACATTTTGTGGGAAAGTTTTGATTATCCTGATAACACTTTCCTTGCTGGAATGCAGCTGAAAAGTAATTTAGTTACTGGTCCATATCGATATCTCACATCTTGGAGAAGCCTTGAAGATCCTGCTCCAGGCGAGTTTTCATATAAGATAGATACACATGGTTATCCTCAACAGGTTACTTCAAAGGGAGCAACAATTCTTTATAGAGCAGGGTCATGGAATGGAATTCTTTTCACTGGTGTTTCTTGGCTAAGAAAGAATAGAATCTCGAATTTCTCATTTGTGTTCACCGACAAAGAACTCTCTTATCAATATGAAAGTCTGAACAATTCAATTATTACTAGATTGGTGCTAGATCCATATGGAACTTCACAACGTTTTATATGGTCAGATAGAACACAAGTTTGGGAGTCTATATCTTCTCGTCCTGAAGACCAGTGTGATGTTTATGCCTTGTGTGGTATCAACTCTAACTGCAATATTAATGCCTTTCCAATATGTGAATGCTTGGAAGGTTTCATGCCAAAATTCCAAACAAAATGGAAGTCATCGAATTGGTCTGATGGGTGTGTAAGGAAAACACATTTAAATTGTCTCCATGGAGATGGATTTTTGAAGTACACAAACATGAAGTTGCCAGATACGTCATCATCATGGTTTGACAACAGCTTGAGCCTTGAGGAATGCAAGAGAACGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATGTCAGAGATGGTGGGAGTGGCTGCTTAGTTTGGTTTGACAACATTGTGGACATGAGAATACACCCAGATCAAGGACAAGACATTTACATTCGGCTGGCATTTTCAGAACTTGatcataaaaaaaataagagaaactTCAAGCGTGCTGGGATTCTTGCAGGGGTTATTACATTGATTATAGGACTAATCGTTCTTGTATTGATCACATCAATATATAGAAAGAAGCTTGGGTATATAAAAACTTTATTTAACAAGAACGAGAAGGGAGATGGTGACTTGGTAACGATATTTGATTTTTCGGCGATCACAACTGCAACAAATAACTTCTCCAACAGAAACAAGTTAGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGTATAATGGTTGATGGCCAAGAGATTGCTGTTAAGAGGCTTTCTAAAACATCAGGACAAGGAATTGAGGAGTTCAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGCAATCTCGCAAAACTTATCGGTTGTTCTATTCAAAAAGATGAAAAGTTGTTGATCTACGAATTCTTGCACAACAGAAGCTTGGATTactttatttttgATACTAAACGAAGCAAGTTACTAGATTGGACTAAGCGCTTGGAAATTATTGATGGGATTGCTCGGGGGCTGCTCTATCTCCATCAAGATTCTAGACTAAGAATCGTACATAGAGATGTCAAGACAAGCAATATTCTTCTTGATATTGATATGGTCCCGAAGATATCGGATTTTGGTTTAGCCAGATTATTTATGAGAGACCAAGCTGAAGCTAATACAAATACAGTGACGGGAACACAtggATATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATAAAATCTGATGTTTTTAGTTTTGGAGTCGTTGTTCTTGAGATAATTAGCGGTTGGAAGAATAGCAGATTTTGTGACCCTCAACATCGTCTAGACCTTCTTGGGCATGCATGGAGACTATGGATGGAAGAAAGGCCAGAGGAGTTAATAGCTGACATATTATGCGATGAGGCCATATGTCCAGAAATAATAAGATTTATTCATGTGGGTCTATTGTGCGTACAACAGCTACCAGAAAATCGGCCTAACATGTCATCTGTGGTCCTTATGTTAAAGGGTGAAAAGTTACTCCCCGAACCAAGTGAACCCGGGTTCTACACAGGAAGAAACAATAATAGCTCAGAATTTTCAATAAATGAAGCTACAATCTCATTGTTAGAGGCCCGATAG 2418 0.3801 MKNHNKVLMLMLCTSFFCSMPIYSIQNTLTSNQFIQYNDTLVSAAGTFEAGFFNFGDPQRQYFGIWYKNISPRTIVWVANRNTPAQNSTAMMKLADQGSLVLLDGSKGIIWNSNSSRIGVKPVVQLLDSGNLVLKDANSAKNILWESFDYPDNTFLAGMQLKSNLVTGPYRYLTSWRSLEDPAPGEFSYKIDTHGYPQQVTSKGATILYRAGSWNGILFTGVSWLRKNRISNFSFVFTDKELSYQYESLNNSIITRLVLDPYGTSQRFIWSDRTQVWESISSRPEDQCDVYALCGINSNCNINAFPICECLEGFMPKFQTKWKSSNWSDGCVRKTHLNCLHGDGFLKYTNMKLPDTSSSWFDNSLSLEECKRTCLKNCSCTAYANLDVRDGGSGCLVWFDNIVDMRIHPDQGQDIYIRLAFSELDHKKNKRNFKRAGILAGVITLIIGLIVLVLITSIYRKKLGYIKTLFNKNEKGDGDLVTIFDFSAITTATNNFSNRNKLGEGGFGPVYKGIMVDGQEIAVKRLSKTSGQGIEEFKNEVKLMATLQHRNLAKLIGCSIQKDEKLLIYEFLHNRSLDYFIFDTKRSKLLDWTKRLEIIDGIARGLLYLHQDSRLRIVHRDVKTSNILLDIDMVPKISDFGLARLFMRDQAEANTNTVTGTHGYMPPEYAVHGSFSIKSDVFSFGVVVLEIISGWKNSRFCDPQHRLDLLGHAWRLWMEERPEELIADILCDEAICPEIIRFIHVGLLCVQQLPENRPNMSSVVLMLKGEKLLPEPSEPGFYTGRNNNSSEFSINEATISLLEAR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00326 805 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Tsu03g00326 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Tsu03g00326 805 CDD STKc_IRAK 502 769 - -
Tsu03g00326 805 SMART serkin_6 496 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00326 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 182 IPR036426 -
Tsu03g00326 805 CDD PAN_AP_plant 335 420 - -
Tsu03g00326 805 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Tsu03g00326 805 Gene3D Hepatocyte Growth Factor 336 421 - -
Tsu03g00326 805 Gene3D - 21 148 IPR036426 -
Tsu03g00326 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Tsu03g00326 805 SMART blect_4 32 151 IPR001480 -
Tsu03g00326 805 Pfam Protein tyrosine and serine/threonine kinase 499 764 IPR001245 GO:0004672|GO:0006468
Tsu03g00326 805 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Tsu03g00326 805 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 797 - -
Tsu03g00326 805 Gene3D Transferase(Phosphotransferase) domain 1 572 773 - -
Tsu03g00326 805 Pfam PAN-like domain 339 405 IPR003609 -
Tsu03g00326 805 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Tsu03g00326 805 SUPERFAMILY Protein kinase-like (PK-like) 481 767 IPR011009 -
Tsu03g00326 805 CDD B_lectin 27 151 IPR001480 -
Tsu03g00326 805 Pfam D-mannose binding lectin 74 177 IPR001480 -
Tsu03g00326 805 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 797 - -
Tsu03g00326 805 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00326 805 SMART ntp_6 340 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00326 Tsu-Chr3 2680951 2684458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00326 427 782 Receptor kinase-like Gene Family AT4G23190 50.270 3.79e-119 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g00326 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00326 - - gmx:100803275 1012.68