Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00325 ATGCAAACATACAAGGTTCTCATGCTAATGCTTCATTACATTCCAACAATATTATCTTTACAATATCAAACTTTTTCTACTATTTCACCAAATCATTCTATCCAAGGTAATCAAACTTTAGTGTCTTCAGCTGGAACTTTTGAAGCTGGATTTTTCAACTTTGCAAATTCACAACTCCAGTACTTTGGTGTATGGTACAAAACAATATCCCCTAGAGTCTGTGTTTGGATTGCCAATAGAGACTCTCCAATACAAAACTCAACACCAATTCTAAAACTAACATATCAAGGTACTCTTACTATTGTTGATGATTCTAGTCCTAGAAGCATTATATGGTCCTCCAATGCATCAACAATTGCGGCGAAACCGGTCTTGTCGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGGGAGAGTTCTGTGGGAGAGTTTTGATTACCCTGGTGACACTTTCCTTGCAGGAATGGAACTCAAGACAAATTTAGTAAATGGTCCTTATAAGTCTCTTACATCTTGGAGAAGTGTTGATGATCCTTCTTTAGTTTTCACTGATAAGGAAGTTTCTTATAAGTATGAAACATTGAAAAAAGAAACTTTTACTAGATTATGGCTTAGTCCAGCAGGTTCTTCACAGAGATTGGTATGGTCAGAGAGGAGAAAAAATTGGGATACTATATCGACTCGTCCGACGGATGCGTGTGCATATTATTCAAGTTGTGGTGCTAATTCTATCTGCAATATCACAAACTCTCCAAGAATATGTCAATGCTTGGAAGGTTTTATACCAAAGTACAAAGAAAAGTGGAAATCTTTAGAATGGTCTGGTGGATGTATTAGAAGAACAAGGTTAAATTGTATTGGAGATGGATTTCGAAAGCACTCAGGAGTAGAGTTGCCAGATACATCGTCTTCCCGGTTTAACAAGAGCTTGAGCCTTGAGGAATATAATGGACATGACAAAACATATAGACCAAGGACAAGATATTTTCATAAGACTTGCAAATTCAGAGTCATGAAAGAAATAGGTGGAGCTTTAACAACAAGAAGCTTGCAATGGAAGCACAAAAGAGAGAGGGAAGATGTGCAGTTATCAACAATATTTGGTTTTTCAACAATATCTAATGCCACAAATCACTTTTCGGACGAAAACAAGATAGGAAAAGGTGGTTTTGGACCAGTATACAAGGGCGTATTGGAAGATGGACTAGAGATTGCAGTAAAGAGGCTATCAGAAACATCAGAACAAGGAGAAGAACAGTTCAAAAATGAAGTCATGTTGATGGCGAAGCTTCAGCATCGAAATCTTGTAAAACTTCTTGGTTGTTCAATTTACCAAAAGGAAAAGCTCCTGATCTATGAATTGATGCCCAACAGAAgcttggattattttatttttgATTCGACACGAAAGCAACAGCTAGATCTGATCAAACGATTTCAAATTATTGATGGGATTGCTCGAGGTCTGCTGTATCTTCATCAAGACTCTAGATTAAGAATCATCCATAGAGACCTCAAAACAAGTAATATTCTTCTTGATAATGATATGAATCCAAAGATATCAGATTTTGGTCTGGCTAGAACATTCAGAGAAAATCAAGATGAGTCTAACACAAATAGATTGATGGGAACATATGGTTATATGCCACCTGAATATGCGGTGCATGGATGTTTTTCAATCAAATCAGATGTTTTTAGCTTTGGCGTAATTGTTCTCGAGATAATTAGTGGGAGAAGGATTCAAAAATTTTATGATCCGCATCATCACCTTAATCTTCTTGGCCATGCATGGAGACTGTGGAGTGAAGAAAAGGCACAAGAGTTAATGGATGAGATATTCCATGGAACAATCATTCCATGTGAAATTCTGAGATGTATTCATGTTGGTCTACTATGTGTTCAACAAATACCAGAACATAGACCAAACATGTCATCTGTGGTCTTAATGTTGAATAGTGAAAAACTGCTACCTGAGCCTAGCCAACCTGGGTTCTATACAGCAACAACTCAACATCCAATTCAGGTAGAATCATCTTCAAGAAGTTGTGAAGATTGTTCACAAAATGAAGCTTCTATGTCAGTGTTAGAGGCACGGTAG 2103 0.3685 MQTYKVLMLMLHYIPTILSLQYQTFSTISPNHSIQGNQTLVSSAGTFEAGFFNFANSQLQYFGVWYKTISPRVCVWIANRDSPIQNSTPILKLTYQGTLTIVDDSSPRSIIWSSNASTIAAKPVLSLLDSGNLVVKDGGRVLWESFDYPGDTFLAGMELKTNLVNGPYKSLTSWRSVDDPSLVFTDKEVSYKYETLKKETFTRLWLSPAGSSQRLVWSERRKNWDTISTRPTDACAYYSSCGANSICNITNSPRICQCLEGFIPKYKEKWKSLEWSGGCIRRTRLNCIGDGFRKHSGVELPDTSSSRFNKSLSLEEYNGHDKTYRPRTRYFHKTCKFRVMKEIGGALTTRSLQWKHKREREDVQLSTIFGFSTISNATNHFSDENKIGKGGFGPVYKGVLEDGLEIAVKRLSETSEQGEEQFKNEVMLMAKLQHRNLVKLLGCSIYQKEKLLIYELMPNRSLDYFIFDSTRKQQLDLIKRFQIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARTFRENQDESNTNRLMGTYGYMPPEYAVHGCFSIKSDVFSFGVIVLEIISGRRIQKFYDPHHHLNLLGHAWRLWSEEKAQELMDEIFHGTIIPCEILRCIHVGLLCVQQIPEHRPNMSSVVLMLNSEKLLPEPSQPGFYTATTQHPIQVESSSRSCEDCSQNEASMSVLEAR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00325 700 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 181 - -
Tsu03g00325 700 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 183 317 - -
Tsu03g00325 700 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 180 IPR036426 -
Tsu03g00325 700 SMART serkin_6 381 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00325 700 CDD STKc_IRAK 387 653 - -
Tsu03g00325 700 ProSiteProfiles Protein kinase domain profile. 381 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00325 700 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 347 700 - -
Tsu03g00325 700 Pfam S-locus glycoprotein domain 184 265 IPR000858 GO:0048544
Tsu03g00325 700 Pfam Protein tyrosine and serine/threonine kinase 384 614 IPR001245 GO:0004672|GO:0006468
Tsu03g00325 700 Gene3D Transferase(Phosphotransferase) domain 1 457 660 - -
Tsu03g00325 700 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 347 700 - -
Tsu03g00325 700 PIRSF SRK 1 183 IPR024171 GO:0004674
Tsu03g00325 700 PIRSF SRK 180 316 IPR024171 GO:0004674
Tsu03g00325 700 PIRSF SRK 329 700 IPR024171 GO:0004674
Tsu03g00325 700 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Tsu03g00325 700 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 181 - -
Tsu03g00325 700 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 183 317 - -
Tsu03g00325 700 SUPERFAMILY Protein kinase-like (PK-like) 366 677 IPR011009 -
Tsu03g00325 700 CDD B_lectin 31 149 IPR001480 -
Tsu03g00325 700 Gene3D Phosphorylase Kinase; domain 1 345 456 - -
Tsu03g00325 700 Pfam D-mannose binding lectin 74 175 IPR001480 -
Tsu03g00325 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Tsu03g00325 700 Gene3D - 19 146 IPR036426 -
Tsu03g00325 700 SMART blect_4 31 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00325 Tsu-Chr3 2669378 2677125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00325 344 666 Receptor kinase-like Gene Family AT4G23230 56.173 1.47e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g00325 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00325 - - mtr:MTR_3g019580 766.533