Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00312 ATGAGGATCAAAGATTTGCTAGGCAAGCTAAACTTTCTTGCAGAGCAAAAGGATGTGTTGGGATTGAAAGAAGGAAGGTTTGCTCGTAATGAACTTGAAGTCGGGCCAAAATCTTCAATAAGAATTCCAATGACATCTTTGGTGGATGAATCCAGCATATGTGGTAGAAAGGGTGATAAAgagaaaattattaattttctaCTTTTAGATAATGGTAGTAGCAACCGTGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACAACCCTTGCTCAACTTGTGTACAACGACCACACGATTCAGAAGAGCTTTAATCTTAAAGGTTGGATCTATGTTTCAGAATCTTTTGACGTTGTTGGACTCACTAAAGCAATTATTGAGTCATTTGGTTGTTCACCAACCAGTGAAAATTTGGAACCACTTCAGCTTCAATTGCAGGAGAGGCTAACGGGAAAGAAATATTTGCTTGTTTTGGATGATGTCTGGAATGGAAATGGGGAAATTTGGGAGCGTTTTCTACTTCCCTTTAACAAAGGATCTTCTGGAAGTAAGCTTATTGTGACAACACGGGACAAGGAGGTTGCAATATCCATGAAATCTTCAATGTTGTTTGATTTAGAGCGACTAGAGGAGAGTGATTCTTGGAGTTTATTTGTGAAACTTGCATTTCATAACCGAAATGTGAGTGAATATCCAATTCTTGAATCAATTGGCAAGAATATTGTAGCCAAGTGTGGAGGGTTGCCGTTAGCAGTAAAAACACTGGGAAACCTcttgcaaaaaaaattctctgAAAGTCAATGGAAAAAGATATTGGAGACTGATTTGTGGTATTTATCAGAGCGCGACAGTAACATAAATCCAGTATTGAGATTGAGTTACCATAATCTTCCTTCCAATATGAAGCGTTGTTTTGCTTATTGTTCCATATTTCCCAAGGGTTATGAGTTTGAGAAGAACACATTAATCAATCTTTGGAAGGCAGAAGGTTTGCTAAATTGTTGCAGAGGAGACAAAAGTGATGAAGAGTTGGGTAATGAATTATTCAATGATCTAGAGTCAATTTCGTTTTTCCAACAATCACCATATTTTGCGTATGATAAGAGTTTTGTCATGCATGATCTTGTCAATGATTTGGCGAAATCAGAGTCCCTACAATTTTGCTTACAAATTGATGGTGATAAGGTGCATGATATATGTGAAAAGACACGTCACATTTGGTTCTCTCTTGATTTGAATGATGATGCTAGAATATCAAAGCAACTTTGTAAGATTAAAGGATTACGCAGCCTGTTCGTAAAAAGACGAGCCTATTATGGTGAACGCATCATGATAAGCAACCACTTGCAATgtgatatattttcaaaactaaaatatttgcgGATGTTGTCATTTCGTGGTTGTAAACTCTCAGAGCTAGCAGATGAGATAGGCAAGTTAAAGCTTTTGCGCTATCTAGACCTGACAAGCACAGAGATTAAAAGTTTGCCTGATTCTATTTGTGAGCTCTATAATTTAGAGACTCTAATATTGAAAGGAACTTATATAAAGAAGATGCCAAAGAAGATAGGGAGGCTAAATCATCTTCAAACGCTGAGTCATTTTGTTGTGGCAGAGAAGCGTGGGTGTGATATTAAGGAGTTGGGATCTCCTTTGCTTAAAGAGGTTTCTATAAGTAAATGTCCCGAATTGAAAAGGGCACCCCTGCCTCAACATCTTCCTTCTTTACAAAAATTGAAGATTGTTGATTGCGAAATGTTGGAGATATCAATTCCTAAGGGTGATAGTATGATAGAGTTACATCTAGAGAAATGTGATTGGATTTTGGTAAATGAATTGCCGACCAGCTTGAAAAAGTTCGTCCTTCTGAAAAATCGGTACGTCGAGTTCTCTGAGGAGCAAAATTTAGTAAACTGTACCATTCTAGAAGAGTTGGAGTTTGATTTAAAAGGAATTGTAAAGCATCCCTCTTTAGATCTGCGTTGCTATAATTCTCTTCGTGAACTTTCAATAAAAGGATGTGACTCCTCCTCCTTTTCCTGGCCTTTTTCACTATATCTCTTCACCAATCTTCAACAGCTCCGTTTGTACGATTTCCCACAGTTGGAATCATTTCCAAGGGGAGGTTTGCCTTCCAAGTTGAGATGGCTTACAATAGAGAAATGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTTTGAGATGGTTCACAGTTAGTGATGAGTTTGAAAACGTGGAGTCATTCCCAGAGGAGAATCTTCTGCCACCAACTCTGAATGATCTTACTTTGACTAATTGTTCAAAGCTAAGAATAATGAACTACAAGGGTTTTATCCACCTCAATTCTCTCCAAGGTCTAGATATTAAGAACTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGGTCTACCCAGTTTATTATTGTGGATTTCAGAATGTCCAATAATAAGGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTCGTCACATCCCTTTTGTGGACATTGACAACAAATGA 2556 0.3764 MRIKDLLGKLNFLAEQKDVLGLKEGRFARNELEVGPKSSIRIPMTSLVDESSICGRKGDKEKIINFLLLDNGSSNRAPIISIVGLGGMGKTTLAQLVYNDHTIQKSFNLKGWIYVSESFDVVGLTKAIIESFGCSPTSENLEPLQLQLQERLTGKKYLLVLDDVWNGNGEIWERFLLPFNKGSSGSKLIVTTRDKEVAISMKSSMLFDLERLEESDSWSLFVKLAFHNRNVSEYPILESIGKNIVAKCGGLPLAVKTLGNLLQKKFSESQWKKILETDLWYLSERDSNINPVLRLSYHNLPSNMKRCFAYCSIFPKGYEFEKNTLINLWKAEGLLNCCRGDKSDEELGNELFNDLESISFFQQSPYFAYDKSFVMHDLVNDLAKSESLQFCLQIDGDKVHDICEKTRHIWFSLDLNDDARISKQLCKIKGLRSLFVKRRAYYGERIMISNHLQCDIFSKLKYLRMLSFRGCKLSELADEIGKLKLLRYLDLTSTEIKSLPDSICELYNLETLILKGTYIKKMPKKIGRLNHLQTLSHFVVAEKRGCDIKELGSPLLKEVSISKCPELKRAPLPQHLPSLQKLKIVDCEMLEISIPKGDSMIELHLEKCDWILVNELPTSLKKFVLLKNRYVEFSEEQNLVNCTILEELEFDLKGIVKHPSLDLRCYNSLRELSIKGCDSSSFSWPFSLYLFTNLQQLRLYDFPQLESFPRGGLPSKLRWLTIEKCPKLIGSREEWGLFQLNSLRWFTVSDEFENVESFPEENLLPPTLNDLTLTNCSKLRIMNYKGFIHLNSLQGLDIKNCPSLESLPEEGLPSLLLWISECPIIREKYKKEGGERWHTIRHIPFVDIDNK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00312 851 Gene3D - 297 387 IPR036388 -
Tsu03g00312 851 PRINTS Disease resistance protein signature 79 94 - -
Tsu03g00312 851 PRINTS Disease resistance protein signature 151 165 - -
Tsu03g00312 851 PRINTS Disease resistance protein signature 248 262 - -
Tsu03g00312 851 PRINTS Disease resistance protein signature 788 804 - -
Tsu03g00312 851 Gene3D Ribonuclease Inhibitor 615 844 IPR032675 -
Tsu03g00312 851 Gene3D Ribonuclease Inhibitor 444 611 IPR032675 -
Tsu03g00312 851 PANTHER OS05G0414200 PROTEIN 2 809 - -
Tsu03g00312 851 Gene3D - 211 296 IPR042197 -
Tsu03g00312 851 SUPERFAMILY L domain-like 374 815 - -
Tsu03g00312 851 Pfam NB-ARC domain 57 277 IPR002182 GO:0043531
Tsu03g00312 851 Gene3D - 39 206 IPR027417 -
Tsu03g00312 851 PANTHER DISEASE RESISTANCE PROTEIN RP 2 809 IPR044974 GO:0006952
Tsu03g00312 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 311 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00312 Tsu-Chr3 2552788 2557413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00312 75 265 WRKY Transcription Factor Family AT5G45050 26.601 1.84e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00312 - - mtr:MTR_3g022790 685.256