Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00297 ATGGCGACTATGTTAAGAGAAACCAAGCTTTCTGTGACGGTGTTATTCAAAAAGATTTTTACTCCTCAGTTCGCCGACAATTTCCGGGGACCGAAGCTTCACATTGAAAAGCTGAACAAAACACTTGTGAGTCTTCAAACTTTACTCGTTTATATTCAGGAGAAACAAATCCCCAATCTTATTGTAGGGTATTGGTTGTATAATCTTAGAGATGCTGTCTTTGAAATTGAtaatttgtttgaccaaatcaaCACTGAACCATTGCAAAGCAGCAAATTGGAagctgatgatgatgatgagtatCAAACCCTAACTCCTCCTACTTCTCCTTTAATTGCAAAATTGCAAAATTTAATTGAGAGATTAGAATGCTTGAGTTCACGAGCACATGGTAGATTTGGTGTTTCCGATTCCAACGGTGTTTCCAATTCCAGCCGTGTTTGGCATGAAACTGCTACAAGTTCTGTTTTCGATGATGATGAATCTTGTATTTATGGAAGAGATGCCGATATAAACAAACTTAAACATCTTTTGTTGTCTACTGATTGTGATGAtagtaaaaaaagaattatttcaATTGTGGGTATGGGAGGGATTGGTAAAACAACCCTTGCTAAACATCTTTACAATGATCCTGAAGTAGATGgcaaatttgatttaaaatcgTGGGTGTATATCTCAATAGATTTTGATATTTCCATGGTTTTGGAAACAATTCTTGAATCTATTCTTTCACAAAAAAACAGTAGTGATGAATCTTTCAATGCAAAAAGAAATGACACTAGTGATGTGGATACCATTTACGATGAATCTTTCAATGCAAAAAGAAATGACACTAGTGATGTGGATACCATTTACCAGAAACTTCTATTAGCGACATTGCTACAAGTTTTGAGCACCGGAAAGTTTTTGCTAGTACTGGATGATGTGTGGGATACAAAATCTTTCAATTGGAAAAATCTGGTGGAAATCTTCAATGCTGGGAAAACGGGAAGCAGGATCATCATCACAACACGGGATGAAAGAGTTGCAAGATCCTTGGAAATCTTTCATTCTGTCCACTATTTGAGACCTCTAGAAAGCGAAGATTGCTGGTCTTTACTTGCCAGGCATGCATTTGGAGAATGTAATGACCAACAACAATCCAATCTAGAAGTAATTGGCagaaaaattgcaaaaacaTGTCATGGGTTACCATTAGCTGCAATAACAGTTGCAGCTTTTATTCGCTTCAAATTATCCACAGATTACTGGAATAGTATGCTAGAAAGTGACATTTGGGAATTGATTGATTATAAGGTTCAACCTGTCCTAAAATTGAGCTACCATTATCTTTCTGCTCCTTTAAAACAATGCTTTGcatattgttcaatttttccaAAGAAGTCCATCTTAGAAAAAAGTGTGGTAGTTCAGTTGTGGATAGCAGAAGGCTTAGTAGAATCGTCTACAAATCAGGAAAAAATCGGTGATGAATACTTTGATGTACTAGTGTCAAAGTCTCTGATACATCGGCGATATATTGGTGATGAGGAAGCAAACTTTGAAATGCATAGCCTCATCCATGATATAGCTACAATGGTTTCATCTTCATACTGTAAAAGGTTGGACGAACATAACCTACATGAAAGGATACATAATTTATCATACAATAGAGGGCTATACGActcatttaataaatttgataaattatatGGCGTAAAAGGTCTGCGTACCTTTCTAGCATTACCATTACAAGAACAATTGCCTCTTTGTTTGTTATCAAACAAGGTAGTACACAACTTGCTGCCAACAATGAAACAATTGGGCGTGTTATCTTTGTCAAACTACAAGAGTATCACTGAGGTTCCCAACTCTATTGGAGATTTGTTATACCTGCGGTACTTAAATCTTTCTCACACTAAGATTGAAAGGCTGCCTTCTGAAATATGCAAACTGTACAATCTGCAATTCTTGTTGTTGTCAGGCTGTAAAAGGCTCACCGAATTGCCAGAGGACATGGGAGAATTGTTTAATTTGCGCCACCTTGACATTAGTCACACTGCATTGAGGGAGATGCCCGTACAAATAGCCAAATTGGAAAATCTTCACACTCTGTCTGATTTTGTTGTCAGCAAGCATAATGGTGGGTTGAAGATTGCAGAGCTAGGAAAATTTCCCCACCTACATGGAAAACTTTCCATTTCACAACTAAATAATGTCAATGACCCCTTTGAAGCAGTTCGTGCCAATATGGAGATGAAAGAACGAATAGATGAGTTAGCTTTAGAATGGGATTGTGATAGTACTTTTTCAGATTCACAAGTTCAAAGTGTTCTACTTGTACTTGAACATTTGCGACCCTCAACAAATTTGAAACGCCTTACCATCAAAGGCTATGGTGGAATCTGCTTTCCAAATTGGTTGGGTGATTCTTTATTTAGAAACATGGTGTATTTAAGGATCTCGGATTGTGATGATTGTGAATGGCTTCCTCCTCTTGGACGATTGGGTAATCTGAAAGAACTCATTGTTGATGGGATGCAATCGGTACAAACAGTTGGTGCTGAGTTCTATGGAAATGATAGTTGTTCATTTCAACCATTTCCCTCCTTGGTGACTCTACGCTTtgagaatatgaaaaattgggAGGAATGGAACTTGATTGGAGGTATGACTACAATGTTTCCTTTTCTAAAAACTTTGTCACTATGCAAGTGCGCGAAACTGAGAGTAGGAAACATGCCTGacatattttcttctttaacTGAACTTGAGTTAAGAGAATGTCCTCTATTGGTGGAATCAACGCCCATCATTGGAGGTACGGCTACAAAGTTTTCTTCCTTGACTGAACTTGAGTTTAGAGAATGTCCTCTACTGGTGCAATTGCCTTCATCATCAGATCATGTCTTCAACCAAACGATGTTCCCATTGAATTCTCTTCAAAAGTTGACTTTAGACGGCTTTCCATCTCTGTTGTCTTTCCCAACAAACGATCTACCAAAAACCTTGAAATTTCTCATAATCAGCAATTGTGAGAATCTAGAGTTCTTTCCTCATGAATACCTGCACAATTTCACATCGCTTGAGGAATTGAAAATATCTTATAGCTGTAATTCAATGATATCATTTACCTTGGGTGCCCTCCCTGTCCTCAAGAGTCTGTTTATTGAGGGTTGTAAAAATCTGAAATCGATATTAATTGCAGATGATGCATCGAAAAAGAGTCTCTCATTTCTTAGAAGCATCAAACTATGGGATTGTAATGAACTGGAGTCATTTCCCCCAGGTGGATTGGCAACTCCAAACCTCGTTTATATTGCATTGTGGAAGTGTGAGAAGCTTCAATCACTACCTGAAGCAATGAACACTCTAACTGGCCTTCAAGAAATGGAAATTGATAATCTACCGGATCTCCAATCTTTTGTCATAGGTGATTTGCCTAGTAGTTTACAGGAACTGACTGTTGGCTCTGTTGGAGGGATTATGTGGAATACTCATCCAACTTGGGAACATCTCACTTGTCTTTCAGTGTTGCGAATTAACGGTAATGATACAGTGAACTCGCTGATGGTGCCATTGCTACCTGCATCTCTTGTGACACTATGCATCCGCGGTTTTAATGATAAAAGCATTGATAGGAAGTGTACTAAGTATGTCTCGATGTCCATTACTGGATGCAAGTTTACGGAGGAAGCAAGGGAATGA 3690 0.3675 MATMLRETKLSVTVLFKKIFTPQFADNFRGPKLHIEKLNKTLVSLQTLLVYIQEKQIPNLIVGYWLYNLRDAVFEIDNLFDQINTEPLQSSKLEADDDDEYQTLTPPTSPLIAKLQNLIERLECLSSRAHGRFGVSDSNGVSNSSRVWHETATSSVFDDDESCIYGRDADINKLKHLLLSTDCDDSKKRIISIVGMGGIGKTTLAKHLYNDPEVDGKFDLKSWVYISIDFDISMVLETILESILSQKNSSDESFNAKRNDTSDVDTIYDESFNAKRNDTSDVDTIYQKLLLATLLQVLSTGKFLLVLDDVWDTKSFNWKNLVEIFNAGKTGSRIIITTRDERVARSLEIFHSVHYLRPLESEDCWSLLARHAFGECNDQQQSNLEVIGRKIAKTCHGLPLAAITVAAFIRFKLSTDYWNSMLESDIWELIDYKVQPVLKLSYHYLSAPLKQCFAYCSIFPKKSILEKSVVVQLWIAEGLVESSTNQEKIGDEYFDVLVSKSLIHRRYIGDEEANFEMHSLIHDIATMVSSSYCKRLDEHNLHERIHNLSYNRGLYDSFNKFDKLYGVKGLRTFLALPLQEQLPLCLLSNKVVHNLLPTMKQLGVLSLSNYKSITEVPNSIGDLLYLRYLNLSHTKIERLPSEICKLYNLQFLLLSGCKRLTELPEDMGELFNLRHLDISHTALREMPVQIAKLENLHTLSDFVVSKHNGGLKIAELGKFPHLHGKLSISQLNNVNDPFEAVRANMEMKERIDELALEWDCDSTFSDSQVQSVLLVLEHLRPSTNLKRLTIKGYGGICFPNWLGDSLFRNMVYLRISDCDDCEWLPPLGRLGNLKELIVDGMQSVQTVGAEFYGNDSCSFQPFPSLVTLRFENMKNWEEWNLIGGMTTMFPFLKTLSLCKCAKLRVGNMPDIFSSLTELELRECPLLVESTPIIGGTATKFSSLTELEFRECPLLVQLPSSSDHVFNQTMFPLNSLQKLTLDGFPSLLSFPTNDLPKTLKFLIISNCENLEFFPHEYLHNFTSLEELKISYSCNSMISFTLGALPVLKSLFIEGCKNLKSILIADDASKKSLSFLRSIKLWDCNELESFPPGGLATPNLVYIALWKCEKLQSLPEAMNTLTGLQEMEIDNLPDLQSFVIGDLPSSLQELTVGSVGGIMWNTHPTWEHLTCLSVLRINGNDTVNSLMVPLLPASLVTLCIRGFNDKSIDRKCTKYVSMSITGCKFTEEARE 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00297 1229 Gene3D Ribonuclease Inhibitor 713 912 IPR032675 -
Tsu03g00297 1229 Gene3D Ribonuclease Inhibitor 995 1153 IPR032675 -
Tsu03g00297 1229 Gene3D Ribonuclease Inhibitor 913 994 IPR032675 -
Tsu03g00297 1229 PRINTS Disease resistance protein signature 644 660 - -
Tsu03g00297 1229 PRINTS Disease resistance protein signature 190 205 - -
Tsu03g00297 1229 PRINTS Disease resistance protein signature 395 409 - -
Tsu03g00297 1229 PANTHER DISEASE RESISTANCE PROTEIN RP 36 958 IPR044974 GO:0006952
Tsu03g00297 1229 PANTHER OS05G0414200 PROTEIN 36 958 - -
Tsu03g00297 1229 SUPERFAMILY RNI-like 858 1192 - -
Tsu03g00297 1229 Gene3D - 147 351 IPR027417 -
Tsu03g00297 1229 Pfam Rx N-terminal domain 26 91 IPR041118 -
Tsu03g00297 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 456 IPR027417 -
Tsu03g00297 1229 Gene3D - 442 527 IPR036388 -
Tsu03g00297 1229 Gene3D - 359 441 IPR042197 -
Tsu03g00297 1229 Gene3D Ribonuclease Inhibitor 581 704 IPR032675 -
Tsu03g00297 1229 Pfam NB-ARC domain 168 423 IPR002182 GO:0043531
Tsu03g00297 1229 SUPERFAMILY L domain-like 517 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00297 Tsu-Chr3 2431140 2434924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00297 613 708 WRKY Transcription Factor Family AT4G12020 39.175 4.28e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00297 - - mtr:MTR_0603s0010 1454.88