Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00290 ATGGCCACCATTCTTGTTCATAGCCAAACATCACCTGTTCAAGATGCTGAAGCTCTCCACCTTGCTTTCAAAGGATGGGGTGCTGATAACAAGGCCATTGTAGCAATATTGGGTCATAGAAATGTTCATCAGAGGCAACAGATTAGGAAGGCTTATGAGGAGCTTTTCGAGGAGGATCTCATCAAACGTCTCGAGTCAGAGATCTCTGGTGACTTTGAGAAAGCTGTGTACCGGTGGATGCTGGAACCTGCAGACCGTGATGCTGTTTTGATCAATGTAGCAATAAGGAATGGCAGCAAAAACTATCATGTGGTTGCTGAAATTGCTTCTGTGCTATCAGCCGAAGAGCTTTTGGCAGTGAGGCGCGCTTATCATAACCGCTACAAGCGTTCCATCGAAGAAGATGTGTCTGCTAACACCACCGGCCATCTTCGTCAGCTTTTGGTTGGATTAGTGAGCTCATTTAGGTATGAGGGAGATGAGATTAATGCAAAATTAGCACAAACTGAAGCTAATGTTATTCATGAAAGTGTTAAGGAAAAGAAAGGCAACAATGAAGAAGAAGTCATAAGGATTCTCACTACAAGGAGCAAGACTCAACTTGTGGCAACTTTCAACCGCTATAGAGATGAACATGGCATCTCCATTAGTAAGAAATTGTTGGATCAAACATCTGATGACTTCCAGAAGACATTGCACACAACTATCCGTTGCATCAATGACCATAAGAAGTACTATGAGAAGGTTTTGCGAAatgctataaaaaaatttggaaccGATGAGGATGGAATAACTCGCGTGATTGTCACAAGGGCTGAGAAGGATCTGAGGGACATCAAAGAGCTTTACTACAAGAGAAACAGTGTTCATCTTGAAGATGCTGTCTCCAAAGAAATCTCAGGGGACTACAAGAAGTTCATCCTCACTCTTTTGGGAAAACAAGACTAA 948 0.4188 MATILVHSQTSPVQDAEALHLAFKGWGADNKAIVAILGHRNVHQRQQIRKAYEELFEEDLIKRLESEISGDFEKAVYRWMLEPADRDAVLINVAIRNGSKNYHVVAEIASVLSAEELLAVRRAYHNRYKRSIEEDVSANTTGHLRQLLVGLVSSFRYEGDEINAKLAQTEANVIHESVKEKKGNNEEEVIRILTTRSKTQLVATFNRYRDEHGISISKKLLDQTSDDFQKTLHTTIRCINDHKKYYEKVLRNAIKKFGTDEDGITRVIVTRAEKDLRDIKELYYKRNSVHLEDAVSKEISGDYKKFILTLLGKQD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00290 315 PANTHER ANNEXIN 6 315 - -
Tsu03g00290 315 Gene3D Annexin 165 240 IPR037104 GO:0005509|GO:0005544
Tsu03g00290 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Tsu03g00290 315 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Tsu03g00290 315 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Tsu03g00290 315 SMART annex3 183 235 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 PRINTS Annexin family signature 174 200 IPR001464 GO:0005509|GO:0005544
Tsu03g00290 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Tsu03g00290 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Tsu03g00290 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Tsu03g00290 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Tsu03g00290 315 SUPERFAMILY Annexin 3 315 IPR037104 GO:0005509|GO:0005544
Tsu03g00290 315 ProSiteProfiles Annexin repeat profile. 165 237 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 Gene3D Annexin 243 313 IPR037104 GO:0005509|GO:0005544
Tsu03g00290 315 Pfam Annexin 172 233 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 Pfam Annexin 87 151 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 Pfam Annexin 14 76 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Tsu03g00290 315 PANTHER ANNEXIN 6 315 - -
Tsu03g00290 315 PRINTS Plant annexin signature 226 244 IPR009118 -
Tsu03g00290 315 PRINTS Plant annexin signature 118 132 IPR009118 -
Tsu03g00290 315 PRINTS Plant annexin signature 160 180 IPR009118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00290 Tsu-Chr3 2367783 2371508 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00290 K17098 - gmx:100806472 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00290 03 2367783 2371508 Tsu08g01335 08 15296624 15301323 PCT