Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00288 ATGAGGATCAAAGATTTGCTAGGCAAGCTAAACTTTCTTGCAGAGCAAAAGGATGTGTTGGGATTGAAAGAAGGAAGGTTTGCTCGTAATGAACTTGAAGTCGGGCCAAaatcttcaataaaaattcCAATGACATCTTTGGTGGATGAATCCAGCATATGTGGTAGAAAGGGTGATAAAgagaaaattattaattttctaCTTTTAGATAATGGTAGTAGCAACCATGCACCAATAATCAGCATAGTTGGTCTTGGTGGGATGGGTAAGACAACCCTTGCTCAACTTGTGTACAACAACCACATGATTCAGAAGAGCTTTGATCTTAAAGCTTGGGTCTATGTTTCAGAATCTTTTGATGTTGTTGGACTTACTAAAGCAATTATTGAGTCATTTGGTTGTTCACCAACCAGCGAAAACTTGGAAACACTTCAACGTCAATTGCTGGAGAGGCTAACAGGAAAGAAATATTTGCTTGTTCTGGATGATATCTGGAACGGAAATGTGGAAATTTGGGACTTTTTGCTACTTCCCTTTAACAAAGGATCTTCTGGAAGTAAGATTATTGTGACAACACGTGACAAGGAGGTTGCAACATCCATGAAATCCTCCATGTTGCTTGATTTAGAGCGACTACAGGAGAGTGATTCTTGGAGTTTATTTGTGAAACTTGCATTTCATAACCGAAATGTGAGTGAATATCCAATTCTTGAATCAATTGGCAAGAATATTGTAGCCAAGTGTGGAGGGTTGCCATTAGCAGTAAAAACATTGGGAAACCTcttgcaaaaaaaattctccGACAGTCAATGGAAAATGATATTGGAGACTGATTTGTGGTGTTTATCAGAGCGTGACAGTAACATAAATCCAGTATTGAGATTGAGTTACCATAATCTTCCTTCCAATATGAAGCGTTGTTTTGCTTACTGTTCCATATTTCCAAAGGGTTATAAGTTTGAGAAGAACACATTAATCAATCTTTGGAAAGCAGAAGGTTTGCTAAATTGTTGCAGAGGAGACAAAAGTGAAGAAGAGTTGGGTAGTGAATTATTCAATGATCTAGAGTCAATTTCGTTTTTCCAACAATCACCATATTTTGCGTATAATAAGAGTTTTGTCATGCATGATCTTGTCAATGATTTGGCGAAATCAGAGTCCCTACAATTTTGCTTACAAATTGATGGTGATAAGGTGCCGGATATATGTGAAAAGACACGTCACATTTGGTTCTCTCTTGATTTGAATGATGATGCTAGAATATCAAAGCAACTTTGTAAGATTAAAGGATTACGCAGCCTGTTGGTAGAAAGACGACACTATTATGGTGAACACACCATAAGCAACAACTTGCAACgtgatatattttcaaaactaaaatatttgcgGATGTTGTCATTTCGTGATTGTGAACTCACAGAGCTAGTAGATGAGATAGGCAATTTAAAGCTTTTGCGCTATCTAAACCTGACAAGCACAAAGATTAAAAGTTTGCCTGATTCTATTAGTGAGCTCTATAATTTAGAGACTCTAATATTGGAAGGAACTGATATAAAGAAGATGCCAAAGAAGATAGGGAGGCTAAACCATCTTCAAACGCTGAGTCATTTTGTTGTGGCAGAGAAGCGTGGGTGTGATATTAAGGAGTTGGGGATGGAACATGTCATTGATCCCGCAGATGCTGCAAAAGCAAATATGAAAGACAAGAAGCATCTAGAAGaattaaatgtgaattttggtgGCAATTTGAATAACAACGGAAGAGAATTGGATGTGTTGGAGGGTCTTGAACCAAATAGCAACTTGAAGAAACTCACCATCGAAAACTACAATGGCAACCGATTTCCAAATTGGCCAAGGGATTGTGATTTACCCAACTTAGTATCTCTTAAATTGAAGAACTGTGGACTATGTTCTCAGTTGCCTCAACACCTTCCTTCTTTACAAACATTGTACATTTATAATTGCAACAAGTTGGAGGAATGTTTATGTCTTGAAGGATCTCCTTTGCTTGAAGAGCTTTATATAAGAGAATGTCCGGAATTGAAAAGGGTTCCACCTCAACACTTTCCTTCTTTACAAAAATTGAAGATAAGTGATTGCAACAAGTTGGAGGAATGTTTATGTCTTGAAGGATctcttttacttgaaaatgtTTCTATAAAAAAGTGTTCCAAATTGAAAAGGGCCCCCTTGCCTCAACATCTTCCTTCTTTACAAAAATTGAAGATTTATGATTGTGAAATGTTGGAGATATCAATTCCTAAGGGTGATAGTATGATAGAGTTAAATCTACAGAAATGTGATCGGATTTTGGTAAATGAATTGCCGACCAGCTTGAAAAAGTTTGTCCTTTGGGAAAATCGGTACGCCGAGTTCTCCATGGAGCACAATTTAGTAAGTTGTACGATTCTTGAAGATTTGAGGTTTGATTTAAGAGGCTTTGTTGTAAATTGTCCCTCTTTAGATTTGAATTGCAATAATTCTCTTCGTCATCTTGAAATAAGAGGATGTCAATCCTCCTCCTTTCCTTTTTCACTACATCTCTTCACCAATCTTCAATATCTCTGTTTGTACGATTACCCACAGTTGGAATCATTTGGAAGGGGAGGTTTGCCTTCCAACTTGAACACACTTGAAATATACAATTGCCGAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTTTGGAATGGTTGACAATTAATGATCATGAGTTTGAAAACGTGGAGTCATTCCCAGAGGAGAATCTGCTGCCACCAACTCTGAAGTATCTTTCTTTGAGAAATTGTTCAAAGCTAAGAATAATGAACAACAAGGGTTTTCTCCACCTCAATTCTCTTGAATATCTATGGATTAAGAACTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGGTCTTCTACACCTCAGCTCCCTTTCTTATTTGTCGATTTCAGAATGTCCAATAATAAGGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTCGTCACATCCCTAAAGTGTATATTGACCGAATTAGCCAGAAGGAATTTAGTAAACTTGGTGAGTTTGAAAACGTGGAGTCATTCCCAGAGGAGAATCTGCTGCCACCAACTCTGAAGATTCTTGAATTGAGAAATTGTTCAAAGCTAAGAATAATGAACAACAAGGGTTTTCTCCACCTCAATTCTCTCCATACTCTAGATATTTGGGACTGCCCTAGTCTTGAGAGCTTGCCAGAGGAGGGTCTACAACTCAGCTCCCTTAATATGTTGTTCATTGAAGAGGGAATGAGATGTTGCCCCAGAAATAAAGCAGCTTTGCACACACCTGAACATAATGAACGCTTGCAGAAGTTCTCAAGCAAGTCTATTGCACATTCTTTGGTTCTACGCAATGCGATGGAAACAGTTGGAACTGATGAGGACGCACTCATGCGTGTTATTGTCACTAGGGCTGAGAAGGACTTGGAGAACATAAGAAAGGTCTATTACAAGAGAAACAGTGTCCACCTTGAGCATTCAATGGCCAAAAAAACTTCAGGAGACTACACTTACTTTGATGGGAAATGA 3579 0.3741 MRIKDLLGKLNFLAEQKDVLGLKEGRFARNELEVGPKSSIKIPMTSLVDESSICGRKGDKEKIINFLLLDNGSSNHAPIISIVGLGGMGKTTLAQLVYNNHMIQKSFDLKAWVYVSESFDVVGLTKAIIESFGCSPTSENLETLQRQLLERLTGKKYLLVLDDIWNGNVEIWDFLLLPFNKGSSGSKIIVTTRDKEVATSMKSSMLLDLERLQESDSWSLFVKLAFHNRNVSEYPILESIGKNIVAKCGGLPLAVKTLGNLLQKKFSDSQWKMILETDLWCLSERDSNINPVLRLSYHNLPSNMKRCFAYCSIFPKGYKFEKNTLINLWKAEGLLNCCRGDKSEEELGSELFNDLESISFFQQSPYFAYNKSFVMHDLVNDLAKSESLQFCLQIDGDKVPDICEKTRHIWFSLDLNDDARISKQLCKIKGLRSLLVERRHYYGEHTISNNLQRDIFSKLKYLRMLSFRDCELTELVDEIGNLKLLRYLNLTSTKIKSLPDSISELYNLETLILEGTDIKKMPKKIGRLNHLQTLSHFVVAEKRGCDIKELGMEHVIDPADAAKANMKDKKHLEELNVNFGGNLNNNGRELDVLEGLEPNSNLKKLTIENYNGNRFPNWPRDCDLPNLVSLKLKNCGLCSQLPQHLPSLQTLYIYNCNKLEECLCLEGSPLLEELYIRECPELKRVPPQHFPSLQKLKISDCNKLEECLCLEGSLLLENVSIKKCSKLKRAPLPQHLPSLQKLKIYDCEMLEISIPKGDSMIELNLQKCDRILVNELPTSLKKFVLWENRYAEFSMEHNLVSCTILEDLRFDLRGFVVNCPSLDLNCNNSLRHLEIRGCQSSSFPFSLHLFTNLQYLCLYDYPQLESFGRGGLPSNLNTLEIYNCRKLIGSREEWGLFQLNSLEWLTINDHEFENVESFPEENLLPPTLKYLSLRNCSKLRIMNNKGFLHLNSLEYLWIKNCPSLESLPEEGLLHLSSLSYLSISECPIIREKYKKEGGERWHTIRHIPKVYIDRISQKEFSKLGEFENVESFPEENLLPPTLKILELRNCSKLRIMNNKGFLHLNSLHTLDIWDCPSLESLPEEGLQLSSLNMLFIEEGMRCCPRNKAALHTPEHNERLQKFSSKSIAHSLVLRNAMETVGTDEDALMRVIVTRAEKDLENIRKVYYKRNSVHLEHSMAKKTSGDYTYFDGK 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00288 1192 Gene3D Annexin 1130 1189 IPR037104 GO:0005509|GO:0005544
Tsu03g00288 1192 SUPERFAMILY L domain-like 365 789 - -
Tsu03g00288 1192 PANTHER OS05G0414200 PROTEIN 2 752 - -
Tsu03g00288 1192 Pfam Annexin 1132 1186 IPR018502 GO:0005509|GO:0005544
Tsu03g00288 1192 Gene3D - 38 207 IPR027417 -
Tsu03g00288 1192 Gene3D Ribonuclease Inhibitor 1003 1110 IPR032675 -
Tsu03g00288 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 311 IPR027417 -
Tsu03g00288 1192 PRINTS Disease resistance protein signature 688 704 - -
Tsu03g00288 1192 PRINTS Disease resistance protein signature 151 165 - -
Tsu03g00288 1192 PRINTS Disease resistance protein signature 79 94 - -
Tsu03g00288 1192 PRINTS Disease resistance protein signature 248 262 - -
Tsu03g00288 1192 SUPERFAMILY Annexin 1125 1187 IPR037104 GO:0005509|GO:0005544
Tsu03g00288 1192 Pfam NB-ARC domain 57 277 IPR002182 GO:0043531
Tsu03g00288 1192 Gene3D - 211 296 IPR042197 -
Tsu03g00288 1192 Gene3D Ribonuclease Inhibitor 438 714 IPR032675 -
Tsu03g00288 1192 PANTHER DISEASE RESISTANCE PROTEIN RP 2 752 IPR044974 GO:0006952
Tsu03g00288 1192 SMART annex3 1141 1189 IPR018502 GO:0005509|GO:0005544
Tsu03g00288 1192 ProSiteProfiles Annexin repeat profile. 1122 1192 IPR018502 GO:0005509|GO:0005544
Tsu03g00288 1192 Gene3D Ribonuclease Inhibitor 715 996 IPR032675 -
Tsu03g00288 1192 Gene3D - 297 387 IPR036388 -
Tsu03g00288 1192 SUPERFAMILY L domain-like 777 1109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00288 Tsu-Chr3 2345892 2355932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00288 80 265 WRKY Transcription Factor Family AT5G45050 26.804 6.30e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00288 - - mtr:MTR_7g021000 1064.29