Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00286 atGGCAGAGTTGGTTGGTGGAGCTTTTCTTTCATCATTCTTTCAAGTGGCTTTTGAGAAGTTGTCTTCCAATGATTTCATTGACTTTTTTAGAAGAAGCAAACTTGATGAGATGCTGCTAGAGAAACTTCATGTTACACTCAATTCTATCAATCATGTGCTGGATCAAGCCGAGACAAAACAGTACCGAAGCATGTACGTAAAGAAGTGGCTTGATGATCTTAAACATATTGGATATGAGGTAGACCAACTGTTAGATGAGATTGCCACTGATGCACCACTGAAGAAGCTGAAAGTTGAATCTCAACCTTCTACTAGCAAGGTATTcaatttcttttcatcttttacTAATCCATTTGAATCTAGGATCAAAGAATTGTTAGAGAAGTTAGAATTTCTTGCAAAGCAAAAGGATATGTTGGGGTTAAAACAAGACATTTGTGCTAGTAATGAAGGTGGAGTCAGTTGGAAACCCTTAAAAAGATTGCCAACTACATCTTTGGTGGATGAATCGAGCATATATGGTAGAGAGGATGACAAAGAGGAAGTAATCAAATTTTTACTTTCTGACATAGATGGTGGCAACCAGGTACCAATAATCAGCATAGTAGGTTTAGGTGGAATGGGAAAAACCACCCTTGCTCAGTTTGTGTATAGCGACAACATGATCCAGAAGAAGTTCGAATTAAAAGCTTGGGTCTATGTTTCAGAAACTTTTGATGTTGTTGGTCTTACTAAAGCAATTTTGAGGTCATTTCACTCTTCGGCAGATGGTGAAGACTTGAATCTACTCCAACATCAATTGCAGCAGAGTCTGACAGGCAAGAAATATCTGCTTGTTTTGGATGATGTCTGGAACGGGAGTGGCGAATGTTGGGAGCGCTTACTACTTCCTTTTAATTATGGATCTACTGGAAGTAAGATTGTTGTGACAACACGTGACAAGGAGGTAGCATCAGTCATGAAGTCCGCCAAACTTCTTAATTTAAAGCAATTGAAGAATAGTGAATGTTGGAGTATGTTTGTGAGACATGCTTTTCATGGCATGAATGCGAGTGAATATCCAAATCTTGAATcaattggaaagaaaataatagaaaagtGTGGAGGGTTGCCTTTAGCTCTAAAAACATTGGGGAATCTCTTGCGAAGAAAATTCTCTCAACGTGAATGGCTTAAGATATTGGAGACAGATTTATGGTGTTTATCAGAGGGTGATAGTAACATTAACTCAGTACTGAGATTGAGTTTCCATCATCTCCCTTCCGATCTGAAGCGTTGCTTTTCTTATTGTTCCATATTCCCCAAAGGTTATATTTTTTGCAAAGGTGAATTAATCAAGCTTTGGATGGCAGAAGGTTTGTTGAAGTGCGGTAGAATTGACAAAAGTGAAGAAGAATTGGGGAATGAATTCTTTGATGATCTAGAGTCAGTTTCATTTTTTCAACGATCAGGATATGTTGATTATAAGTACTTTGTTATGCATGATCTTGTCAATGATTTAGCAAAATCAGTGTCGGGAGAATTTTGTTTGAGAATAGAAGGTGATTGGGCACAAGATATTCCTGAAAGGACACGTCACATTTGGTGTTCTCTTGAATTAAAAGACGGTGATAAAATATCACAACATATTTATCAGATTAAGGGATTGCGCAGTTTGATGGCACGAGCAGGGTATGGTGGCCAACGCTTCAGGGTATGCAACACAGTACAATATGATTTGTTTTCAAGGCTAAAATATTTACGCATGTTGTCCTTAAGATTTTGTAATCTCAAGAAGCTAGCCAATGAAATAAGCAACTTAAAGCTTTTGCGTTATCTAGATCTTTCTCGGACTGGGCTCACAAGCTTACCTGATTCCATTTGCATGTTGTCTAATTTGGAAACATTGATATTGATCCATTGTCCATTGACCGAGTTCCCTTTAGATTTTTACAAACTTGTTAGTTTACGCCATCTTATTCTAAAAGGCACCCATATAAAGAAGATGCCGGAGCAGATAGGAAGACTTAACCATCTTCAAACGTTGACGGATTTTGTTGTGGGAGAGCACAAAGGGTCTGATATTAAGGAGTTGGCAGAACTCAACCATCTTCGAGGTACGCTTCGTATTTCAGGGTTGGAAAATGTCATTGACCGTGTAGATGCAGTAACagcaaatttgaaaaataagaaatatttaGAACAATTATGTATGATGTTTTCTTACAGTAAAGAAATTGATGTCTTTGTCTTGGAAGCTCTTCGACCAAATAACATCCTGAATAAGCTTGATATAATAGGCTACTGCGGCAATAGCTTTCCAAATTGGATCAGAGATTGTCATTTACCCAATTTGGTATCTCTTAAGCTGATTGAATGTAAATTTTGTTCTCGGATGCCACCACTTGGGCAGCTCTCCTCTCTCAGGGAGCTTTCTGTTTCAGGCTGTCATGGAATAGACACCATAGGCGAAGAGTTTTACGGAAATAACTCATCAAATATAGCTTTCAGGTCCCTTGAAATTTTGCGTTTTGAGAAAATGTCTGAATGGAAAGATTGGTTATGTATTGAAGGTTTCCCTTTGCTGAAAGAACTTTCAATAAGATACTGCCCCAAGTTGAAAAGGACACCGCCTCAACACCTTCCTTCTTTGCAAAAACTGGTGATTACTGACTGCCGAGAGTTAGAGGCTTCAATTCCCAAGGCTGGTAATATCGTTGAGCTAGAGCTAAAAGGATGTGAAAACATTATGGTAATTGAATTGCCGTCCACCTTGAAAAATGTCATCCTTTGTGGAACTCGGATTATCGAGTCCTCCTTGCAGCAAATTCTACTCAACAACACCTTTCTTGAAACTTTGTTAGTTGAGGACTTCAACGGTACATATCTAGAATGCAACTCTTTGGATTTGCGTAGTTGTAATTCTCTTCGCTTTATATCTATATGTGGTTGGCACTCCTCAACTTTTCCTTTTGCACTACACTTGTTCACCAATTTTCATTCTCTAAAGTTGGAAGATTGTCCACTATTGGAATCATTTCCTGCAGGAGGTTTGCCTTCTAGGCTGAGCATCCTCCATATATACAGATGCCCGAAACTGATTGCTTCGAGAGAGAAGTGGGGTTTGTTCCAACTCAATTCTCTGAAAGAATTCATT 3138 0.3792 MAELVGGAFLSSFFQVAFEKLSSNDFIDFFRRSKLDEMLLEKLHVTLNSINHVLDQAETKQYRSMYVKKWLDDLKHIGYEVDQLLDEIATDAPLKKLKVESQPSTSKVFNFFSSFTNPFESRIKELLEKLEFLAKQKDMLGLKQDICASNEGGVSWKPLKRLPTTSLVDESSIYGREDDKEEVIKFLLSDIDGGNQVPIISIVGLGGMGKTTLAQFVYSDNMIQKKFELKAWVYVSETFDVVGLTKAILRSFHSSADGEDLNLLQHQLQQSLTGKKYLLVLDDVWNGSGECWERLLLPFNYGSTGSKIVVTTRDKEVASVMKSAKLLNLKQLKNSECWSMFVRHAFHGMNASEYPNLESIGKKIIEKCGGLPLALKTLGNLLRRKFSQREWLKILETDLWCLSEGDSNINSVLRLSFHHLPSDLKRCFSYCSIFPKGYIFCKGELIKLWMAEGLLKCGRIDKSEEELGNEFFDDLESVSFFQRSGYVDYKYFVMHDLVNDLAKSVSGEFCLRIEGDWAQDIPERTRHIWCSLELKDGDKISQHIYQIKGLRSLMARAGYGGQRFRVCNTVQYDLFSRLKYLRMLSLRFCNLKKLANEISNLKLLRYLDLSRTGLTSLPDSICMLSNLETLILIHCPLTEFPLDFYKLVSLRHLILKGTHIKKMPEQIGRLNHLQTLTDFVVGEHKGSDIKELAELNHLRGTLRISGLENVIDRVDAVTANLKNKKYLEQLCMMFSYSKEIDVFVLEALRPNNILNKLDIIGYCGNSFPNWIRDCHLPNLVSLKLIECKFCSRMPPLGQLSSLRELSVSGCHGIDTIGEEFYGNNSSNIAFRSLEILRFEKMSEWKDWLCIEGFPLLKELSIRYCPKLKRTPPQHLPSLQKLVITDCRELEASIPKAGNIVELELKGCENIMVIELPSTLKNVILCGTRIIESSLQQILLNNTFLETLLVEDFNGTYLECNSLDLRSCNSLRFISICGWHSSTFPFALHLFTNFHSLKLEDCPLLESFPAGGLPSRLSILHIYRCPKLIASREKWGLFQLNSLKEFI 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00286 1046 SMART LRR_typ_2 601 624 IPR003591 -
Tsu03g00286 1046 SMART LRR_typ_2 647 670 IPR003591 -
Tsu03g00286 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 431 IPR027417 -
Tsu03g00286 1046 Gene3D - 33 128 - -
Tsu03g00286 1046 Gene3D - 159 327 IPR027417 -
Tsu03g00286 1046 Gene3D - 331 416 IPR042197 -
Tsu03g00286 1046 SUPERFAMILY L domain-like 493 888 - -
Tsu03g00286 1046 Pfam Rx N-terminal domain 9 101 IPR041118 -
Tsu03g00286 1046 SUPERFAMILY RNI-like 830 1029 - -
Tsu03g00286 1046 Gene3D Ribonuclease Inhibitor 537 921 IPR032675 -
Tsu03g00286 1046 Coils Coil 123 143 - -
Tsu03g00286 1046 Pfam NB-ARC domain 176 396 IPR002182 GO:0043531
Tsu03g00286 1046 Gene3D - 417 505 IPR036388 -
Tsu03g00286 1046 PRINTS Disease resistance protein signature 873 889 - -
Tsu03g00286 1046 PRINTS Disease resistance protein signature 271 285 - -
Tsu03g00286 1046 PRINTS Disease resistance protein signature 368 382 - -
Tsu03g00286 1046 PRINTS Disease resistance protein signature 199 214 - -
Tsu03g00286 1046 PANTHER DISEASE RESISTANCE PROTEIN RP 14 1007 IPR044974 GO:0006952
Tsu03g00286 1046 PANTHER OS05G0414200 PROTEIN 14 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00286 Tsu-Chr3 2321275 2332973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00286 200 385 WRKY Transcription Factor Family AT5G45050 26.842 2.84e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00286 - - mtr:MTR_7g021000 1170.22