Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00277 ATGGCACAGTTTCATGTTTTGGCTGTTGATGATAGTATCATTGATAGAATGTTGATTGAAAGACTCCTCAAAACCTCTTCATTCCATGTTACTGTGGTTGATTCTGGTACCAAggctttgaaatttcttggttTGGTTGAAGATGAGGTGAGGAATGAAAAGCCTCCATCTATTGCAACAGAAACAGATCAGGTTGTAGAAGTGAATCTGATCATAACTGATTACTGTATGCCAGGAATGACAGGCTATGATCTGCTGAGAAAGATCAagGAATCTAATTCTCTTAAAGATATACCGGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGAATTAACAGatgcttagaagaaggagctGAAGAATTCTTTCTGAAACCAGTTCAACAATCAGATGTAAACAAACTGAAACCACATTTGTTGAAATCAAAAGTTAAGAATAATGATGATCAAATGAACAACAAAAGGAAGGAAACAGAACAACAATGCAATTCCATTGGAAAACAAGGCAAAAAATGTAACCTATAA 528 0.3277 MAQFHVLAVDDSIIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPPSIATETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSKVKNNDDQMNNKRKETEQQCNSIGKQGKKCNL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00277 175 MobiDBLite consensus disorder prediction 158 175 - -
Tsu03g00277 175 ProSiteProfiles Response regulatory domain profile. 5 141 IPR001789 GO:0000160
Tsu03g00277 175 CDD REC_typeA_ARR 6 136 - -
Tsu03g00277 175 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 161 - -
Tsu03g00277 175 Coils Coil 142 162 - -
Tsu03g00277 175 MobiDBLite consensus disorder prediction 147 175 - -
Tsu03g00277 175 Gene3D - 5 173 - -
Tsu03g00277 175 SUPERFAMILY CheY-like 3 142 IPR011006 -
Tsu03g00277 175 SMART REC_2 4 140 IPR001789 GO:0000160
Tsu03g00277 175 Pfam Response regulator receiver domain 6 133 IPR001789 GO:0000160
Tsu03g00277 175 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 161 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00277 Tsu-Chr3 2274039 2276190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00277 2 147 Response Regulator Gene Family AT3G57040 70.748 3.31e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu03g00277 Response_reg 2.3e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00277 K14492 - gmx:100818762 263.462