Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00267 ATGGCAACTATTGTTGGAGAAGCACTCCTTGCAGCTTCTTTGGAAGTGTTGTTGGAAAAGATTGTTTCTGGTGAATTTGCTGAGTTATTTCGGAGTACCAAACTTGATGCTGTGCTGTTGGAGAAGCTGAAGATAACATTGCTGAGTCTTCAAGCTGTACTTCATGATGCTGAGGAGAAACAGATCACCAACCCTGCTGTCAAGGAATGGCTGGATATGATCCGTGATGCTGTCTTTGAAGCTGGTGATTTGTTTGATGAAATCAACACTGAGGCTTTGAGGTGCAAAGTGGAAGCCGGGTTTGAAACCCTAACTACTACTACTCAGGTGCTGAAAAAACTTTCTTCTCGTTTCAAAATGTTTAATAAAAAGATCAATTCTAAACtgcaaaaattatttgaaagatTAGAACATTTAAGAAACCAGAATCTTGGTTTAAAAGAAGGTGTTTCTAGCAGTGTTTGGCATGGAACTCCTACTAGTTCTGTAATGGTAGATGAATCTGCTATTTATGGGAGAGATAATGATAGAAAGAAACTCAAAGAGTTTTTGTTGTTAGAAGATTCTAGTGACGGTGGAAGTAAAATCGGAGTGATTTCCATTGTGGGCATGGGAGGGCTAGGAAAAACAACACTAGCGAAACTCCTCTACAACGACCGTGAAGTGATGGAGAAATTTAGGGTGAGAGGATGGGCACATATCTCAAAAGATTTTGATGTTGTTACAGTCACTAAAACCATTCTTGAATCTTTTACTTCAAAAAGAAATGACACTGATGACCTGAATATTCTACAACAGGAATTGCTGCAAAGGTTAAGCAATACAAAGTTTTTGCTTGTACTGGATGATATGTGGTATGGAAAATATGTTGACTGCTGGAACAATTTGACCGATATCTTTAATGTTGGCGAAATGGGGAGTAAGATCATTATCACAACAAGAGATGAAAGAGTTGCAACAACCATGCAAACCTTTCTTCCGATCCACAAACTGGAACCTCTACAGAAGGATGACTGCTGGTCTTTGCTTGCCAAACATGCATTTCAAGTAAGTTATAACTATGAACAACGAGGCAAGCTTGAAGTAATTGGCAAAGAAATTGCCAAAAAATGTCATGGCTTACCGTTAGCTGCAGTTGCACTTGGGGGTCTTCTTCGAATCAAATCATCTCCAAATGACTGGAATGATGTATTAAAAAGTAGTATTTGGGAATTGACAGAAGATATGCAACCCGCACTGCTATTGAGCTATCGTTATCTTCCTTCTGCTTTAAAAGGATGCTTTGcttattgttcaatttttccgAAGAACTCAATCttagagaaaaaaatgatagtTCAGTTGTGGATTGCAGAAGGTTTAGTACCTCAACCCAAAAGTGAGAAAAGTTGGGAAAAAGTAGCTGAAGATTACTTTGATGAACTAGTGATGAGGTCTCTCATACGTCAACGGTCCATTGATGATGAGAAAATATGCTTTGAAATGCATGACCTCATCAATGATTTGGCTACAAAAGTTTCATCTTCGTGTTGTATTAGGCTGGACGAACAAAAGCCACATGAAAGGGTACGCCATTTGTCATTTAATAGAGGGTCATATGACTCATATGATAAGTTTGATAAATTGCTTGAATTAAAAGGTCTGAGAAGCTTTCTACCATATACATCAGAAGAATTAGGGTGGTCCTATTCCATATCGGAGAAGTTAGTTTTTGACTTGCTGCCAACAATGATACAGTTACGCGTGTTGTCTCTATCACAGTACTCAAATATTACCAAGTTGCCCAACTGTATTGGAAATTTGATATACCTGCGATACTTAAATCTCTCGCACACTAAGATTGAAATGTTGCCTTCTGAAACATGCAAGCTTCACAATCTTCAGACCTTATTGTTGTCACATTGCGATAGGCTCATTGAATTGCCGAAGGACATGGGAAAATTAGTTAATCTGCGCCACCTTGATATCAGAGGCACTCAATTGAAGGAAATGCCTGTACAAATATCCAAACTAGAAAATCTCCAAATCTTGTCGGACTTTATTGTAAGCATGCAGGACGTTGGATTGAAGATTGCAGATTTGGGAAAATATCCCCATCTACAGGGAAGCCTTTCCATCTCACAACTTCAAAATGTAACTGAACCATCCGATGCTATTCAAGCAAAGTTGGAGATGAAAAAACAAATCGACAAGTTGGTACTACAATGGTCTGACACTACTCCTTCAAATTCAGAAATACAAAGTGTTGTATTTGAACGGCTGCGTCCCTCGACAAATTTGAAGAGTCTCACCATCAATGGATATGGTGGAAACAACTTTCCAGATTGGCTGGGCGCTTCTTCATTTAGCAACATGGTGTGTTTGAGGATCTCCCATTGTGAAAATTGTTCTAGGCTGCCACCCCTCGGGCAATTAGCTAATCTGAAAGAACTCTTTATTGCTGAGATGAAATCAGTAAAGAGTGTTGGTGCTCAGTTCTATGGAAGTAGTTCTCCTTCGTTTCAATCGTTTCCCATTTTGGAGACTCTAGAATTTGATGCAATGCCAGAGTGGGAAGAATGGTATTTTACCGATGGTACAACTACAAAGTTTCCTCGTCTAACACGTTTGTCACTGCTACGTTGTCCGAAACTCCAAGGAAACATACCCTTTGGACAATTAGGTAAGCTAAAAGAACTTCGTATTGAATTGATGGAATCATTGAAGACACTTGGTACTGAGTTCTATGGAAGTGGTATTTCTCCAATGTTTCAATCATTTCCGTCCTTGGAGACTTTACAGTTTGTGAATATGCCACAGTGGGAGGAATGGAAGCTGATTGGTGATACATCTCTAGAGTTTCCTAGTCTTACACGCTTGTCACTGCATAATTGTCCGAAACTCAGAGGAAATGTACCAGGCAACCTTCCTAGTCTTACAAGTCTATCAGTGAAACGTTGTCCCAAACTCAAAGGGATGACACCCAACAACCTTCCTTCCCTTAGTGAACTTGTGTTAGAGAAGTGTCCGCGATTTATTGAGTCAAGGCATTCAGACGACATTAGCTACAATATAATTACAAGGCCATCATCAGATGTATTCAGCCAATTGATGATCGGTCTCAATTCTCTTCGAAAGATGAAATTAAGCAACATTCCATCTTTAACTTCCTTCCCGAGAGACGGTCTGCCTAAAACCTTACAATCTCTCGCTATTTATGACTGTAGGAAGCTGGAGTTTCTTCCGCATGAATCCTTGCAAAATTATACATCACTTGATACTTTGAAAATATCCAAAAGTTGTAATTCAATGACATGGATTAACTTGTGCTCTCTACCTGTCCTCAAAAGTCTATATATTTGCGGCTGTAAAAATCTAAAAGAGGTATTAATTGCAGAAGATGTGTCGCAACAGAATTTATTGTTCcttagaaccatcaaagtagAGGATTGCCATGAACTGGAGTCAGTTTCGCTGAGTGGATTGCGCATTCCTAACCTCATTCATTTAATTGTGAGTGGGTGTAAGAAGCTTCGTTCGCTACCAGAATCAATGAACACTCTAGCTAGCCTTCAAAAAATGGAAATTCATGACCTTCCAAATCTGCAATCGCTTTCCATGGATGATTTTCCTATTAGTTTACGGAAACTGAGTGTTGGCAATGTTGGAGGGATTTTGTGGAATACAACTTGGGAACGTCTCACTTCTCTTTCAGAGTTGCTAATTGCGGGCGATGATATTGTGAAGGCGCTGATGAAAAAGGAAGTTCCATTGCTACCTGCTTTTCTCGTTTCCTTAGTCATTTATGGTGTTGAAGATATAAAATGCTTGGATGGGAAGTGGCTTCAACATCTCACCTCTCTCCAACACTTTACGATTTTGGAAGCTCCCAAGCTCGAAAATGATCACATGAGTGCCACATCCAACTGTGAGCTGTCATGGATCGCTGAAAAGGATTGA 3939 0.3894 MATIVGEALLAASLEVLLEKIVSGEFAELFRSTKLDAVLLEKLKITLLSLQAVLHDAEEKQITNPAVKEWLDMIRDAVFEAGDLFDEINTEALRCKVEAGFETLTTTTQVLKKLSSRFKMFNKKINSKLQKLFERLEHLRNQNLGLKEGVSSSVWHGTPTSSVMVDESAIYGRDNDRKKLKEFLLLEDSSDGGSKIGVISIVGMGGLGKTTLAKLLYNDREVMEKFRVRGWAHISKDFDVVTVTKTILESFTSKRNDTDDLNILQQELLQRLSNTKFLLVLDDMWYGKYVDCWNNLTDIFNVGEMGSKIIITTRDERVATTMQTFLPIHKLEPLQKDDCWSLLAKHAFQVSYNYEQRGKLEVIGKEIAKKCHGLPLAAVALGGLLRIKSSPNDWNDVLKSSIWELTEDMQPALLLSYRYLPSALKGCFAYCSIFPKNSILEKKMIVQLWIAEGLVPQPKSEKSWEKVAEDYFDELVMRSLIRQRSIDDEKICFEMHDLINDLATKVSSSCCIRLDEQKPHERVRHLSFNRGSYDSYDKFDKLLELKGLRSFLPYTSEELGWSYSISEKLVFDLLPTMIQLRVLSLSQYSNITKLPNCIGNLIYLRYLNLSHTKIEMLPSETCKLHNLQTLLLSHCDRLIELPKDMGKLVNLRHLDIRGTQLKEMPVQISKLENLQILSDFIVSMQDVGLKIADLGKYPHLQGSLSISQLQNVTEPSDAIQAKLEMKKQIDKLVLQWSDTTPSNSEIQSVVFERLRPSTNLKSLTINGYGGNNFPDWLGASSFSNMVCLRISHCENCSRLPPLGQLANLKELFIAEMKSVKSVGAQFYGSSSPSFQSFPILETLEFDAMPEWEEWYFTDGTTTKFPRLTRLSLLRCPKLQGNIPFGQLGKLKELRIELMESLKTLGTEFYGSGISPMFQSFPSLETLQFVNMPQWEEWKLIGDTSLEFPSLTRLSLHNCPKLRGNVPGNLPSLTSLSVKRCPKLKGMTPNNLPSLSELVLEKCPRFIESRHSDDISYNIITRPSSDVFSQLMIGLNSLRKMKLSNIPSLTSFPRDGLPKTLQSLAIYDCRKLEFLPHESLQNYTSLDTLKISKSCNSMTWINLCSLPVLKSLYICGCKNLKEVLIAEDVSQQNLLFLRTIKVEDCHELESVSLSGLRIPNLIHLIVSGCKKLRSLPESMNTLASLQKMEIHDLPNLQSLSMDDFPISLRKLSVGNVGGILWNTTWERLTSLSELLIAGDDIVKALMKKEVPLLPAFLVSLVIYGVEDIKCLDGKWLQHLTSLQHFTILEAPKLENDHMSATSNCELSWIAEKD 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00267 1312 Gene3D - 416 506 IPR036388 -
Tsu03g00267 1312 SUPERFAMILY L domain-like 865 1218 - -
Tsu03g00267 1312 Pfam NB-ARC domain 193 400 IPR002182 GO:0043531
Tsu03g00267 1312 PANTHER DISEASE RESISTANCE PROTEIN RP 25 880 IPR044974 GO:0006952
Tsu03g00267 1312 PANTHER DISEASE RESISTANCE PROTEIN RP 883 1050 IPR044974 GO:0006952
Tsu03g00267 1312 Coils Coil 122 149 - -
Tsu03g00267 1312 PRINTS Disease resistance protein signature 198 213 - -
Tsu03g00267 1312 PRINTS Disease resistance protein signature 622 638 - -
Tsu03g00267 1312 PRINTS Disease resistance protein signature 271 285 - -
Tsu03g00267 1312 PRINTS Disease resistance protein signature 371 385 - -
Tsu03g00267 1312 Coils Coil 40 60 - -
Tsu03g00267 1312 PANTHER OS05G0414200 PROTEIN 883 1050 - -
Tsu03g00267 1312 Gene3D - 14 137 - -
Tsu03g00267 1312 SMART LRR_typ_2 648 671 IPR003591 -
Tsu03g00267 1312 SMART LRR_typ_2 601 624 IPR003591 -
Tsu03g00267 1312 Pfam Rx N-terminal domain 12 99 IPR041118 -
Tsu03g00267 1312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
Tsu03g00267 1312 Gene3D Ribonuclease Inhibitor 917 1310 IPR032675 -
Tsu03g00267 1312 PANTHER OS05G0414200 PROTEIN 25 880 - -
Tsu03g00267 1312 Gene3D - 333 415 IPR042197 -
Tsu03g00267 1312 Gene3D Ribonuclease Inhibitor 525 908 IPR032675 -
Tsu03g00267 1312 SUPERFAMILY L domain-like 495 931 - -
Tsu03g00267 1312 Gene3D - 158 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00267 Tsu-Chr3 2166756 2171006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00267 196 684 WRKY Transcription Factor Family AT5G45050 23.227 3.34e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00267 - - mtr:MTR_1g037610 1800.79