Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00264 atgaatgaaaacaaagatcatcaacaaaatcaaaaccctcCAACATCACAACAAgaatcaccaagaaaacaaaacattattATAGGAAGTGGAAGTACTACAAATGAGAGACTAAAAAGAGATGAATGGAGTGAAGGAGCAGTAACAACACTTCTTGAAGCATATGAATCAAAATGGATACTAAGAAACAGAGCTAAACTCAAAGGACAAGATTGGGAAGATGTTGCAAAATATGTTTCATCAAGATCAAACTCAACAAAATCACCAAAGACACAAACACAGTGTAAGAATAAGATTGAGTCTATGAAAAAAAGGTATAGATCAGAATCAGCTAGTTCAGATGTTTCAGCTTGGCCTTTGTATTCTAGACTTGATCTTCTTCTTCGTGGGACAGGACAATTATCTACTACAACAGTAGTAGCTTCACAATTGCAAcataataatcataatcatgGTTTGGTTTTGTTGGAACCTTCATCAGTTGTTGTGTCACAAGGACAAGAAGAAGCTCATCAGTCACTAGCTCCTACTATTGTTGCTAATCCACCAATTGCAACTGCTCAAAATTCACATGGATCAAATGGGGTTGATAAATTGGCCAAGGAAGAAGAGTTAGAAACTAAATCATCTGACCATATAGCTAACAAGAATCAAGTGGACACGGATAGTAGCACGCCCGCACTTTACAGCGAAAAGGACGAGCGAAGATCGAAAAAGAGGAGAATGAGAACAGAGAACAATAACAACAAGCGACAAAAGAAAGAAGCGATGGGAATAGCAGAAAGCATAAGGTGGCTAGCAGAAGTAGTTGTAAGGTCAGAGCAAACAAGAATGGAGACATTGAAAGAGATAGAGAAGATGAGAGTTGAAGCTGAAGCAAAGAGAGGTGAAATGGAAATCAAGAGAACTGAAATTCTTGCTAATACACAACTTGAAATTGCTAGGATATTTGCAAATGTTAATAATAAAGATGTTGATTCATCATTGAGAATTGGAAGAAGTTAA 1005 0.3423 MNENKDHQQNQNPPTSQQESPRKQNIIIGSGSTTNERLKRDEWSEGAVTTLLEAYESKWILRNRAKLKGQDWEDVAKYVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESASSDVSAWPLYSRLDLLLRGTGQLSTTTVVASQLQHNNHNHGLVLLEPSSVVVSQGQEEAHQSLAPTIVANPPIATAQNSHGSNGVDKLAKEEELETKSSDHIANKNQVDTDSSTPALYSEKDERRSKKRRMRTENNNNKRQKKEAMGIAESIRWLAEVVVRSEQTRMETLKEIEKMRVEAEAKRGEMEIKRTEILANTQLEIARIFANVNNKDVDSSLRIGRS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00264 334 MobiDBLite consensus disorder prediction 184 256 - -
Tsu03g00264 334 MobiDBLite consensus disorder prediction 196 215 - -
Tsu03g00264 334 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 16 330 - -
Tsu03g00264 334 Coils Coil 281 301 - -
Tsu03g00264 334 Coils Coil 235 255 - -
Tsu03g00264 334 MobiDBLite consensus disorder prediction 1 43 - -
Tsu03g00264 334 Gene3D - 43 108 - -
Tsu03g00264 334 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 16 330 IPR044823 -
Tsu03g00264 334 MobiDBLite consensus disorder prediction 1 34 - -
Tsu03g00264 334 Pfam Myb/SANT-like DNA-binding domain 40 126 IPR044822 -
Tsu03g00264 334 MobiDBLite consensus disorder prediction 227 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00264 Tsu-Chr3 2135956 2138562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00264 30 138 Trihelix Transcription Factor Family AT3G14180 36.283 1.20e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu03g00264 Myb_DNA-bind_4 9.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00264 - - gmx:100799917 393.66