Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00244 ATGGACGCTCTTTCTAGCATAGCGTCAAACGTAGCTTTACCTCTCCTACGACAATTTACTTATGTGTTGATGTACAACAGTTACCTCATTGAACTTGAGAATGAGATTCAGAAGCTGCAGAGGGAGGAGAAAGAAATGAAGCACAGTGTTGAAGCTGCAAAACGGAACGGTGAAGAGATTGAAGACACGATTCGTGACTGGTTTTCTAGAGTGCAATCATCCATAGAAGAAGCACAAGCATTCCTTCGAGGCgaagagaaagaaagtgttGGATGCTTGGATGTGTACTCGAGGTACACGAACAGTCAGAGAGCAAAAAGCCTGGTGGATATTCTTTGTGGAAtcaaaaaagaaacatttgaTAGAATTTCGTACCGTTGTGCATTGAAATGCAATTTCAGTTCTAGTGCTAGAGGTTATGTGGATTTGGAATCAAGAACAACAATGTTGAATGAAATTTTGAATGTCTTAAAAGAGGATTCTACTGTTCACATGATTGGAGTGTATGGAATGGCTGGTGTAGGTAAAACTGCATTGGTGAAGGAGCTAGCATGGAAAGCCGAGAAAGATGGTATATTCGATGTGGTAGTGGTGGCTAATGTGACAAAGTCTCCTGACGTGGGAACGATTCGAGCTGAAATAGCTGATGGGTTAGGGCTTAAGTTTGATGAGCTGACTGAGGTGGGACGGGCGAGTCGGTTACGTCAAAGGATTAGGCAGGAGATGAAGATTCTTGTGATATTGGACGATATTTGGGGAAAGCTTAGTTTAACCGAGGTTGGTGTTCCTTTTGGCGACGATCATGTGGGTTGCAAAGTGTTGGTAACATCCAGAGATCTTAATGTGTTGACTACTGACTTAGGTGCAAAGAAGGTTTATAGACTCGAAGTTTTGTCTGAGGATGAGAGTTGGAAATTGTTCGAAAAGAGGGGAGAGAATGCTGTTAAAGATCTTAGCATTCAACCTGTAGCAATGAAAGTAGCCAAAAACTGTGCTGGTTTGCCacttttaattgttaatttggTGGAAGCATTGAAGAACAAAGATTTATATGCTTGGAAGGATGCACTTGAGCAGTTAACAAATTTCGACTTTGATGGATGTTTCTATTCTAAAGTGTATTCAGCTATTGAACTAAGTTATGATTCTTTAGAAAGCCAAGAACTCAAAacattctttcttcttttagGTTCAATGGGAAATGGTTATAACATAAAAGAATTGTTGGTGTATGGTTGGTGTTTAGGTTTGCATAAACATGTCGATACATTGGCAGATGGAAGAAACAGACTTCACAAATTGATAGACAATTTAAGAGATGCATGTTTTCTGCTTGAAGGTGAAAGAGATTCGGTTGAGGCGCTTGAAGTTGTTCGCGTTGTGGCTGCCTCCATTGCGTTGAAGCTCAAGCCGTTCTTTGCCGTGGAGAGAAACGCTAAATTGAAAGAATGGCCAAGAaaagattttttgaaaaattgtcatCATATTTTCTTGGATTGGTGTTTGATCGATGAACTTCCTGAGAGGTTAGAATGTCCTAACTTGAAGATACTCAAACTTCACTCTCAAGGTAACCATTTGAAAGTTCATGATAATTTCTTTGATCAAATGAAAGAACTTAAGGTACTAAGTTTAGGAGGCGTGAATTGTACTCCGTCACTTCCTTCATCTCTTGCTCTTTTGACAAACCTCCAAGCACTCGCTCTTTGTAAATGTGTGTTGGAAGACATTTCTATTGTCGGAGAAATCACAAGTTTAGAGATTCTTAATCTCGCAAAATCTGAGCTTAGAGTGATCCCTCCTGAAatacaaaaattgataaatctACGGTTGCTCAACTTGACTGATTGCTCGACACTACAAATAGTACCTCGCAATCTGCTATCAAGCCTGACAAGCTTAGAAGAACTCTATATGGGGATCTCTAATGTTCAATGGGAGTTTAAggttaaagaaattgaaaacctaaacaaaaattcaattctAAGTGAGTTGAAAAATTTGCATCAGCTATCTACTTTGAATATGCACATAAATGATGCTTCACTTTTTCCTAGAGACATGCTTTCCTTTGGAAGACTAGAAAGTTACAAGATTTTGATTGGTCAAGGATGGAAATTTTCTGAGGAGGAGTCTGAGGACTACAAAAGTTCAAGAGTTCTTAAGCTCAATTTGAGCACGGATCCAAGAATTCTCATGGATTATGGAATAAAAATGTTGATGAACCGCGCTGAAGATTTGTATTTAGCTGAACTGAAGGGTGTCAAAGAAGTACTTTATGAAttgaatgatgaaggattttcgCGATTGAAGCATCTTAATATTCAAAATTCTGATGAAATGGAGAGCATTATTGGATCAACCATATGGTCTCATCATGATAATGCTTTTCCCAACTTGGAATCTTTGATTCTTCATAATGTGATGAAATTGGAGAGAATATGCAGTGAACCACTTCCAACACAAGCTTTTGCAAAACTACAAGTTATTAAAGTGAAAAATTGTGATATGATGGAGTTTGTTTTCTTGCATTCTATGGTTCAACACCTTTCAGAACTTGTTGAAATTGAGATTTCTGAATGTAGAATTGTGAATTATATCATAGCCAAGCAAAgacaagaagaagatgaaggagaaACTGACAAGATCGCACTCCCAAAATTGCGTTCGCTCACACTTGAATCTTTACCCTCCCTTGTTAGTCTCTCTCCTGAGTCATGCATCAAGGGTAGTGAAAACAACAATGACTTCTCTAGTCAACTTTTGAGTGATAAGGTTGAATTTCCATGTTTGGAGACCTTGAAGCTTCAATCAATCAATGTCCAGAGGATATGGGATGACCAACTTTCAGCACATTCTTGCTTTGAAAATTTAACCAAATTGACAGTAGATGGTTGTGAAAAGTTGAAATATCTATTTTCATACTCAGTGGCTGAAAGACTTGTCAAACTTGAACATCTTTTAATTAGTTCATGCAAATTGGTGGAAGAGATATTTGTTCCTGATGAAATTATGAGTCACATTCCTCATGTCCATGATGACATTATGAGTCACATTGCTCATATTGGAAAATCTTCACATGTTGAAATGGTTCCAATTTTCCCCAACTTGGAGACATTAGTGATTTCTAACATGGACAACTTGAAGTCAATATGGCCTAACCAACTCACTCAAAACTCATTTTGCAAgttgaaaaaaatggaaatcaCATCATGTGACCAGCTTTTGAATGTATTCCCAAGTCATGTGCTTAACAAATTACAAAGCATGGAATCATTGAATATAAACAATTGTCTTGCACTAGAAGTTGTATATGAAATAGATGCTataagagaagaagaagaacttgAAATTTCACTGAGGACTTTATCTTTAGGAAATTTGCCAAATCTAAAGTATTTGTGGAATAAGGATCCTCAAGGAAGTATCAAGTATCAAAACTTGTTTACGGTTAAAGTAACAAAATGTGAAAGTCTAAAACATATGTTTCCATTTTCTGTGGCTAAAGATCTGTTGCAACTACAAGTCCTTGAGATAAGTGATTCTGGCGTAGAGGAAATTATCGCGAAAGATCAAGGAGAGGATAAAGAGGAACATGTTGGACTTGTTTTCACAAGATTACTGTCTTTGAAGTTTTTGAATTTGCAAGAACTTAGATGCTTTTGTAGTGGAAATCACAACTTTAGATTCCCATTGTTGAATAAATTATATGTGGTTGAGTGTCCTAAAATGGAGACTTTCTCTTATGGAATCTTAAGGGCATCAATTCTTAGAAAAATATGTTTGAATCAGAATGGAGATCAATGTTACTGGGAAGGTGAACTTAATACTACTATAAGAAATCTTTTCGATAGAGGTTTCCAAGGAAGACTATTGGTTTCATAG 3885 0.3542 MDALSSIASNVALPLLRQFTYVLMYNSYLIELENEIQKLQREEKEMKHSVEAAKRNGEEIEDTIRDWFSRVQSSIEEAQAFLRGEEKESVGCLDVYSRYTNSQRAKSLVDILCGIKKETFDRISYRCALKCNFSSSARGYVDLESRTTMLNEILNVLKEDSTVHMIGVYGMAGVGKTALVKELAWKAEKDGIFDVVVVANVTKSPDVGTIRAEIADGLGLKFDELTEVGRASRLRQRIRQEMKILVILDDIWGKLSLTEVGVPFGDDHVGCKVLVTSRDLNVLTTDLGAKKVYRLEVLSEDESWKLFEKRGENAVKDLSIQPVAMKVAKNCAGLPLLIVNLVEALKNKDLYAWKDALEQLTNFDFDGCFYSKVYSAIELSYDSLESQELKTFFLLLGSMGNGYNIKELLVYGWCLGLHKHVDTLADGRNRLHKLIDNLRDACFLLEGERDSVEALEVVRVVAASIALKLKPFFAVERNAKLKEWPRKDFLKNCHHIFLDWCLIDELPERLECPNLKILKLHSQGNHLKVHDNFFDQMKELKVLSLGGVNCTPSLPSSLALLTNLQALALCKCVLEDISIVGEITSLEILNLAKSELRVIPPEIQKLINLRLLNLTDCSTLQIVPRNLLSSLTSLEELYMGISNVQWEFKVKEIENLNKNSILSELKNLHQLSTLNMHINDASLFPRDMLSFGRLESYKILIGQGWKFSEEESEDYKSSRVLKLNLSTDPRILMDYGIKMLMNRAEDLYLAELKGVKEVLYELNDEGFSRLKHLNIQNSDEMESIIGSTIWSHHDNAFPNLESLILHNVMKLERICSEPLPTQAFAKLQVIKVKNCDMMEFVFLHSMVQHLSELVEIEISECRIVNYIIAKQRQEEDEGETDKIALPKLRSLTLESLPSLVSLSPESCIKGSENNNDFSSQLLSDKVEFPCLETLKLQSINVQRIWDDQLSAHSCFENLTKLTVDGCEKLKYLFSYSVAERLVKLEHLLISSCKLVEEIFVPDEIMSHIPHVHDDIMSHIAHIGKSSHVEMVPIFPNLETLVISNMDNLKSIWPNQLTQNSFCKLKKMEITSCDQLLNVFPSHVLNKLQSMESLNINNCLALEVVYEIDAIREEEELEISLRTLSLGNLPNLKYLWNKDPQGSIKYQNLFTVKVTKCESLKHMFPFSVAKDLLQLQVLEISDSGVEEIIAKDQGEDKEEHVGLVFTRLLSLKFLNLQELRCFCSGNHNFRFPLLNKLYVVECPKMETFSYGILRASILRKICLNQNGDQCYWEGELNTTIRNLFDRGFQGRLLVS 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00244 1294 PANTHER - 1 1261 - -
Tsu03g00244 1294 SUPERFAMILY L domain-like 723 1099 - -
Tsu03g00244 1294 Gene3D Ribonuclease Inhibitor 475 874 IPR032675 -
Tsu03g00244 1294 Gene3D - 124 291 IPR027417 -
Tsu03g00244 1294 CDD AAA 149 277 - -
Tsu03g00244 1294 Gene3D Ribonuclease Inhibitor 1080 1275 IPR032675 -
Tsu03g00244 1294 Gene3D Ribonuclease Inhibitor 882 1079 IPR032675 -
Tsu03g00244 1294 SUPERFAMILY L domain-like 489 1163 - -
Tsu03g00244 1294 Coils Coil 22 56 - -
Tsu03g00244 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 395 IPR027417 -
Tsu03g00244 1294 Pfam NB-ARC domain 147 382 IPR002182 GO:0043531
Tsu03g00244 1294 PANTHER DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) FAMILY PROTEIN 1 1261 - -
Tsu03g00244 1294 PRINTS Disease resistance protein signature 165 180 - -
Tsu03g00244 1294 PRINTS Disease resistance protein signature 238 252 - -
Tsu03g00244 1294 PRINTS Disease resistance protein signature 604 620 - -
Tsu03g00244 1294 PRINTS Disease resistance protein signature 331 345 - -
Tsu03g00244 1294 Gene3D - 297 385 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00244 Tsu-Chr3 1968594 1974691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00244 158 438 WRKY Transcription Factor Family AT5G45050 25.839 7.69e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00244 - - gmx:100814903 1761.5