Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00241 ATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGAGAAAGGGGTCAGCTCACACCATTTAATAATGACTTGTTTGACCAAGTAGTTGCAGAATGCAACCAACATCACGGTGAGCTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATGTCCAGACGGCTAGAAATGCTGACCACTATGGAGCCCTAATCCACCTATTTTCTATAGTCCGAAATAAACGTTGTCTAACAGCCTATGTGTATAACCGAGCAGAAACTATACGGAACTTGTTATGGAAGATAGGGCCCGTGATTCCtaaagaaattgaagagaagCTTAATCATTGGGAGGAAGAGTATTTCAAGAAGCATTCTGCAGCGTTGAAATCTTATATGTCAAAAGCTCTGGTTGATCTGACTGTGGATATGGTACCACCAAAAGATCCATACATACAAGTAAGAGTCCTTGAAGACATAAGAGAAGGCATTGTACTTAGTGATGATAAAAATCCCAACTTTGCCCGACATTCCATGCACTTTCTGAAACGAACTGATGCTGAGAAATATATCTCAAGGGGCTTAATGGAGGAGCTCACTGGTTGA 600 0.405 MYGRKACQLVKEFASGERGQLTPFNNDLFDQVVAECNQHHGELQSLIRKMQEEGLDVQTARNADHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWKIGPVIPKEIEEKLNHWEEEYFKKHSAALKSYMSKALVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHFLKRTDAEKYISRGLMEELTG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00241 199 Pfam GINS complex protein 47 116 IPR021151 -
Tsu03g00241 199 Gene3D - 1 134 - -
Tsu03g00241 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Tsu03g00241 199 CDD GINS_A_psf1 3 133 IPR005339 GO:0000811|GO:0006260
Tsu03g00241 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00241 Tsu-Chr3 1959666 1961676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00241 1 199 Core DNA Replication Machinery Family AT1G80190 68.812 3.20e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00241 K10732 - qsu:112021696 332.028