Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00225 ATGGTGCAAGAGAAGAAGCTAGTGGATGAAGTGTCCGGTTGGCTTAGAATCTATGATGATGGTTCGGTGGACCGGACATGGACCGGACCACCGGAGGTCAAATTCATGATTGAACCGGTTGCACCCCATGAACATTTTATCAAAGGAGTTGCTATTCGTGACGTGACAACCTCCATGACTACCACCAATGACGGTTCCATTCACCGCGCCCGACTATACCTACCGGAGAAAACACCTAATGACAATATAAAAATGCCCATACTGATGCACTTTCATGGTGGCGGTTTTTGCATTACCGAACCAAATTCGTTCATGTACTACCATGTGTACACCCAGTTTGTCCGATGTACTCGCTCTATTTGTGTCTCTCCTTTCCTACGACAAGCACCAGAGCACCGTCTTCCTGCTGCCATCGATGACGGGTTTGCAACACTCAAGTGGCTTCAATCAGTTGCCAGGGGAGACGCCCGTGACCCGTGGCTTGAGGAATATGGTGACTTCGACAAAGTTTTCCTCATTGGAGATAGCGCGGGAGGAAACTTAGTCCATGAAATAGCAGCTAGAGCTGGTTCGACTGACTTGAGCCCAGTTCGACTCGCAGGTGCAATTCCAATCCATCCAGGGTTTGTCAGGTCAATCCGAAGCAATTCCGAAATTGAAATGCCACAATCACCATTTCTAACATTGGACATGTTGGACAAATTTTTGAGTTTGGCACTACCAATTGGGAGCAACAAGGACCATCCCTTCACATGTCCCATGGGCACGACTGCGCCACCCATTGACGGCCTAAAGCTGCCGCCGTTTCTTTTATGCGTAGCTGAAAAAGACTTGATGAGGGATACAGAAATGGAGTACTATGAAGCCATGAAGAAGGCCAATAAAGAAGTGGACTTGTTTGTGAGCAAGGGAATGACACATTGTTTCTATCTAAACAAGATTGCTGTGGATATGGACTCTACTGTTAGATCCGAAATGGATGCACTCATTGGGAGGGTCAAAGAGTTCATTGAGAAGCATTAA 1023 0.4702 MVQEKKLVDEVSGWLRIYDDGSVDRTWTGPPEVKFMIEPVAPHEHFIKGVAIRDVTTSMTTTNDGSIHRARLYLPEKTPNDNIKMPILMHFHGGGFCITEPNSFMYYHVYTQFVRCTRSICVSPFLRQAPEHRLPAAIDDGFATLKWLQSVARGDARDPWLEEYGDFDKVFLIGDSAGGNLVHEIAARAGSTDLSPVRLAGAIPIHPGFVRSIRSNSEIEMPQSPFLTLDMLDKFLSLALPIGSNKDHPFTCPMGTTAPPIDGLKLPPFLLCVAEKDLMRDTEMEYYEAMKKANKEVDLFVSKGMTHCFYLNKIAVDMDSTVRSEMDALIGRVKEFIEKH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00225 340 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 337 - -
Tsu03g00225 340 SUPERFAMILY alpha/beta-Hydrolases 6 339 IPR029058 -
Tsu03g00225 340 Gene3D alpha/beta hydrolase 6 338 IPR029058 -
Tsu03g00225 340 Pfam alpha/beta hydrolase fold 88 310 IPR013094 GO:0016787
Tsu03g00225 340 PANTHER ARYLACETAMIDE DEACETYLASE 3 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00225 Tsu-Chr3 1792985 1794007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00225 7 338 Carbohydrate Esterase AT5G16080 32.153 2.01e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00225 - - lja:Lj0g3v0229819.1 551.206