Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00224 ATGGTGCAAGAGAAGAAGCTAGTGGATGAAGTGTCTGGTTGGCTTAGAATCTATGACGATGGTTCGGTAGATCGGACATGGACTGGACCACCTGAGGTCGAGTTCATGATTGAACCGGTTGCTCCCCATGAACAGTTCATTGAAGGAGTTGCCATTCGTGATGTGACAACCGCCACCATCAATGACGGTTCCATCCATCGCGCTCGATTATACCTACCGGAGAAAACACCCAAGGATAATGAAAAGTTGCCCATACTCATCCACTTACATGGTGGCGGTTTCTGCATTACTGAACCAAATTTATTCATGTACTACCATGTGTACACCCAGTTCGTCCGCTGCACTCGATCTATCTGTGTGTCTCCGTTCCTCCGACGAGCACCAGAACACCGTCTTCCTGCTGCCATTGAGGACGGATTTGCAACGCTTCAGTGGCTCCAATCAGTTGCCAAGGGAGACACCCGTGACCCATGGCTTGAGGAACACGGAGACTTCAGCAAAATTTTCCTCATTGGAGATAGCTCTGGAGCAAACTTAGTCCATGAAGTAGCAGGTAGAGCCGGTTCGATCGACCTGAGTCCAATTCGTCTTGCTGGAGGAATTCCAATCCATCCTGGATTTGCTAGGTCAAACCGAAGCCAATCCGAAATTGAAATGCCACAAACACCATTTCTAACATTAGACATGTTGGACAATTTTTTGAGTTTGGCATTACCAATTGGGAGCAACAAGGATCACCCGTTCACATGCCCGATGGGCGAGGGCGCGCCACCCCTTGACGGCCTAAAATTGCCGCCATTTCTTCTATGTGTAGCTGATAAAGACTTGTTGTGGGATACACAAATGGAGTACTACGAAGCAATGAAGAAGGCCAATAAAGAAGTGGACTTGTTTGTGAGCAAGGGAATGACACATAGTTTCTATCTCAACAAGATTGCCGTAGATGTGGACCCAACTGTTAGATTTCAAATGGATGCACTCATTGGTAGGGTCAAGGAGTTCATTGAGAagcattaa 1017 0.47 MVQEKKLVDEVSGWLRIYDDGSVDRTWTGPPEVEFMIEPVAPHEQFIEGVAIRDVTTATINDGSIHRARLYLPEKTPKDNEKLPILIHLHGGGFCITEPNLFMYYHVYTQFVRCTRSICVSPFLRRAPEHRLPAAIEDGFATLQWLQSVAKGDTRDPWLEEHGDFSKIFLIGDSSGANLVHEVAGRAGSIDLSPIRLAGGIPIHPGFARSNRSQSEIEMPQTPFLTLDMLDNFLSLALPIGSNKDHPFTCPMGEGAPPLDGLKLPPFLLCVADKDLLWDTQMEYYEAMKKANKEVDLFVSKGMTHSFYLNKIAVDVDPTVRFQMDALIGRVKEFIEKH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00224 338 Pfam alpha/beta hydrolase fold 86 308 IPR013094 GO:0016787
Tsu03g00224 338 Gene3D alpha/beta hydrolase 6 336 IPR029058 -
Tsu03g00224 338 PANTHER ARYLACETAMIDE DEACETYLASE 3 335 - -
Tsu03g00224 338 SUPERFAMILY alpha/beta-Hydrolases 6 337 IPR029058 -
Tsu03g00224 338 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00224 Tsu-Chr3 1783215 1784600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00224 7 336 Carbohydrate Esterase AT5G16080 31.454 6.99e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00224 - - lja:Lj0g3v0229819.1 561.222