Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00221 ATGATCAATGAGAAAATGAATGATTCACCATGTTTCACAGATTCATCTTCATTTTCTGTTCCAAATACTTTCAttggtcttcttcttcttaactTCAAAATCAGATCTTCATCTTCatgtaacaacaacaacaatcttcTCTTTACTCCTTCTCAGTTATTCAGAGATTTTGTTACAAGAGAATTCAATGCTTTTCTTTGGATTTTTCTTCTTGTTATCACTACCCTTTTGGTTAAAAGACTCTTTGATATCTTCACTTTGTTGtataaagctaaaaaaataccTGGACTTCCATCTTCATCGTTTTTTGGACACTATAAACTCCTCtccaaacaaaatttcaatgATGTGTTGTCAGAATCCCATGAGAAGTATGGTCCAATTGTTAAGCTGTGGTTAGGCCCTACTAAGCTTCTGGTGTCAGTTAAGGATCCAGTGCTAATTCAAGAGATGCTTATAAAGGCTGAGGATAAGTTACCTTTTACTGGAAAAGCCTTTCATCTAGCCTTTGGGGATTCAAACCTTTTTGCTCCTTCCTATGAAAAGGTCCAAAAGAGAAGGGAGTTATTGGCAACAGAGTTGAATGAAAGATTGATGACGACTGCTGATCTGAATCCTCTGAAAGTTGCAGACGTTATCATAGATCAAATAGAAAACATCAAAGTTAGAGGAAGCATTGGTTGCGAGCTGGTTTCTCAGCATATGGCTTTCACATTAATGGGGGCGACATTCTTTGGAGATGGCTTCTTGGATTGGCCGAAGGCTGCAGTATACGAGGAACTTCTTATGATGATTGCTAAAGATGCTTGCTTTTGGGCTTCCTATAATGTTACTCCATTTTGGAAACAAGGATTTTGGAGATATCAACATTATTGTACAGAGTTAAAATGCTTAACTCAAGACATCCTTCAACATTGCAGAAAGAGCTGCAAGATTTTAGGCCATATTGATCAAAATGTTCATAGCAAGAGTTCCAAGCTGGAAATGAAATTAGCAGATGGTGCACAATACAGCTCTAATGACAGTTTCCAAAATTACCATTTCTTTCGTGACCTTAATGATGAACAAAATTCTAAGGAAGATCCTTACGGGAATATCATGCGTGTGATGCTTCATGGATGTCAAACTACAGGTTCTTTAATTGCCAATGTATTGACTAATCTTGCCGTGCATCTGGAAATTCAGGACAAGGTTTATTCGGAGATTAGCATGGTTGGGAAAAACCCATCAAAATATGAGCATGAAGAAGTTTATAGGATGCCGTTGCTATTGGCTACAATTTATGAATCTGCACGCCTTCTTCCCACTTGGGTTATGCTGCAGAGGTGTTCTACAAAACACGATGTGAGATTTTCAACTGGTGTAACCATACCAGCTGGAGCTGTAATGGTTGTGCCTGTTCAATTGGTACAGAAGGATGGCTACAATTGGGGGAAAGATGCAAGTGATTTTAATCCATACCGATTTCTGTCAAACATTACAAAAGGATCAGGTTCTGAAGAACAACTTGATTATGGAACCAGCTCGTTTGTACTAAACAATCCAAATGAAAATGCAGCATTTCTTCCTTTTGGATCCGGTACACGTGCATGCGTCGGGCAGAAATTTGTTATCCAAATTGTTGCCACATTGCTGGCATCATTACTCAAGAAATACGAGATAAGACTCAACTCTAGCTCAGATGGTGACTCGGAAccaatcttgaaaaatcatcttcttcaacatcaTCCTAACTCACAAATACTGTTTGTGAGAAGGgaccagtga 1767 0.3611 MINEKMNDSPCFTDSSSFSVPNTFIGLLLLNFKIRSSSSCNNNNNLLFTPSQLFRDFVTREFNAFLWIFLLVITTLLVKRLFDIFTLLYKAKKIPGLPSSSFFGHYKLLSKQNFNDVLSESHEKYGPIVKLWLGPTKLLVSVKDPVLIQEMLIKAEDKLPFTGKAFHLAFGDSNLFAPSYEKVQKRRELLATELNERLMTTADLNPLKVADVIIDQIENIKVRGSIGCELVSQHMAFTLMGATFFGDGFLDWPKAAVYEELLMMIAKDACFWASYNVTPFWKQGFWRYQHYCTELKCLTQDILQHCRKSCKILGHIDQNVHSKSSKLEMKLADGAQYSSNDSFQNYHFFRDLNDEQNSKEDPYGNIMRVMLHGCQTTGSLIANVLTNLAVHLEIQDKVYSEISMVGKNPSKYEHEEVYRMPLLLATIYESARLLPTWVMLQRCSTKHDVRFSTGVTIPAGAVMVVPVQLVQKDGYNWGKDASDFNPYRFLSNITKGSGSEEQLDYGTSSFVLNNPNENAAFLPFGSGTRACVGQKFVIQIVATLLASLLKKYEIRLNSSSDGDSEPILKNHLLQHHPNSQILFVRRDQ 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00221 588 Gene3D Cytochrome P450 89 580 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00221 588 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 524 533 IPR017972 GO:0005506|GO:0016705
Tsu03g00221 588 PANTHER CYTOCHROME P450 FAMILY 4 66 562 - -
Tsu03g00221 588 PANTHER CYTOCHROME P450 4C3-RELATED 66 562 - -
Tsu03g00221 588 SUPERFAMILY Cytochrome P450 91 586 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00221 588 Pfam Cytochrome P450 95 582 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00221 588 PRINTS E-class P450 group I signature 122 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00221 588 PRINTS E-class P450 group I signature 381 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00221 588 PRINTS E-class P450 group I signature 531 554 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00221 588 PRINTS E-class P450 group I signature 521 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00221 Tsu-Chr3 1756123 1761374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00221 366 563 Cytochrome P450 AT5G24950 32.161 1.50e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00221 - - gmx:100809563 819.305