Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00204 ATGGCAGAAACAGCAGTGTTGTCTGTTTTGGAAAAACTCAGCCAATTTGTAGTTGAAGAAGGAACTCTGTTGACACAGGCTGGAAGATACTTGGAAGAGATCAAAGAAGAACTTGAGAGCATCCAAAACTTGCTTAAGGATGCAGATAGAGTGGCAGCTGATGAAGAAGGAGGAGGAGCCAATGAAGGAGTCAGAACTTGGTTGAAGCAGTTGAGAGAAGCATCTTTTCGCATCGAAGATGTCATTGATGAGTATATCATGCATCAGACACAAAAGAATACCCATTCTAGATTCATAGCCACACTCCAAAAGGTTCCTGGCTTAAACAAATACATGAATCCAGTCCACCAGATTGCTTCTGAGATTCAAGACATCAAGTTATTACTTGGTGAAATCAAACAAAGAAGTGAAAGGTATAAATTTAAGTGTGAAAGTGGATCAAGCAGATCAAGAGGGTCTAAAGCTGCCAGATTTGATGACCCTCCAATGGCTCCTTATTTCATTGAAGAGACTCAACTTGTGGGGTTTGAGGATCCAAGAGATGAACTGGTTAGATGGTTGGTGGGGGGAACCGGTGAGGTCGAGGTGGTTTCTGTTGTTGGCATGGGAGGACTCGGTAAAACCACTCTCGTTAAGCATGTTTTTGATGATCTGTCGGTGAAAATGCACTTTGATTGCCGCTCTTTCGTAACAGTTTCTCAATCATACACGATGAGGGAGTTGTTGATACAAATGATAAAGGAGTTTTGCAAGGACAGCAATGAGCCTATTACAAAGGGTCTGCAGAAGATGGATCACCAAAAATTGATTACTCATGTCAGACAATACCTTCGGTCAAAAAGGTACTTGGTTTTATTTGATGAtgtttggaaagaaaaaatttcTGATGAGATTGAACATGCCTTAATTAGTAATAACAAAGGAAGTAGAATCATTGTGACCACTAGAATGATGCCTGTAGCTGAATATTTTAAGAAATCTTTTCATGTTCATGTTCACAAGCTACGACCTTTGTCTCCTGAGAAAGGATGGGAACTTTTCTGCAACAAGGCATTTAGATCTGAGCCTGGAGGGCAATGTCCAACAGAACTTGAGGAGATGTCAAATGAAATTGTTCAAAAATGTGGAGGGCTACCACTGGCAATAGTGGCTATTGGAGGTCTTTTgtcaacaaaatttaaaaccatgttTGAGTGGATAAAGCTGTATCAAAATCTCAGAATGGAGTTAGAGCGCAATGTGCATTTGACTGATCTAGTGAAGATTTTATCTATTAGTTACGATGATTTGCCTTACCATTTGAAAGCATGTGTGCTGTATTTTGGTATATATCCTGAGGACTACACCATCAATAGCAAGAGACTTACTCGACAATGGATGGCTGAAGGGTTTGTTAGGTACGAAGAGAAAAGAAATCTGGAGGAAGTTGCTGGAGAATACCTGACAGAGTTGATACATAGAAGTTTGGTTCAAGTTTCTGAAGTTGGTTTTGATGGGAGAGTCAAAAGTTGTCAAGTTCATGATGTGTTGCGTGAAGTGATCATTAGAAAAATGAAAGATTTAAGCTTTTGCCATTTAATGCATGAATATGATGAACAAGTCACAGTTGGAATGACTAGGCGCTTGTCTATAACTTCCATCTCCAACAATGTgttgaaaaacacaaaaaactcaGGAATTTGTGCTATTTTCGTTTTCAACAAAGGTGAATTGCCTAAAGATTTCATGGATGGATTGTCTGCCAAGTTCAAGCTTTTGAAAGTACTTGATTTCGAGAATTCTCTGTTGAATTCTGTTTCTGATAACTTTGGTAATCTTTTCCATCTAAGGTACTTGAACCTGAGCCGTACTAAAGTCACGGTTCTTCCCAGATCCATTGGTAAACTAGTCAACTTAGAAACGTTGGATCTAAGGCAAACTAAAGTTGATAAGTTACCAAGGGAGATAAACAAGCTCACAAAGTTAAGGCTTCTTCTAGCTTATTATAGAAGATATGAAGGTCATTACTCTATGTTGAACTTTACAATAGGAGTGAAAATGCAAGAAGGTATCGGATGCTTGAAATCTTTACAAAAGCTTTACTTTTTGGAAGCAGATCATGGTGGAATATACCTTATTGAAGAGCTCAAAATGTTGAAACAGTTAAGGAAGTTAGGCATAAAACGTGTGCGGCAAGAATATGGAATTGCTCTATGTGCTGCAATACAAGAGATGAAACACCTTGAATCTCTAAATATTGGTGCTATAGCTAAGGATGAAATTCTTGACTTGGATCTTGTATCAGCTCCGCCCCATCTTAGAGTGCTCAATTTGAAATGTAGACTAACAAAGTTGCCTAATTGGATTCCAAATCTCAAGTATCTTGTGAAGCTAAGACTTTGCTTATCTAAATTTGAAGATgatccattaaactctttgaAGAATTTGCCGAATTTGTCGAGGCTGAGTTTGTGGGATGACGCCTTTTATGGTGAAAGATTGCATTTTCAGAAAGGATGGTTTCATAAGCTGAAGGAGTTGGATCTCACTAGATTAAATAGACTAAGTTTTGTATCTATAGACAGAGAAGCTTTACTTAGTCTTGAACACTTGAGATTTAACAGCAACCCTCAATTGAAGGTGTTACCCGAAGACctcaaaaacttgaaaaaccTTCAATTCCTTGGATTTGCTGATATGCCAGTTGAATTAGTTAATAGCATTGATCATGAGAAAAGTGGACCATGCCATTGGATTATCAATCATATTCCCCTTGTACAAATCCGTCAAAATGTGGGATCAAAATATCACGACTATGAGTTGTACCGCATTCCTACTCAATTCATTGTCTGA 2832 0.3725 MAETAVLSVLEKLSQFVVEEGTLLTQAGRYLEEIKEELESIQNLLKDADRVAADEEGGGANEGVRTWLKQLREASFRIEDVIDEYIMHQTQKNTHSRFIATLQKVPGLNKYMNPVHQIASEIQDIKLLLGEIKQRSERYKFKCESGSSRSRGSKAARFDDPPMAPYFIEETQLVGFEDPRDELVRWLVGGTGEVEVVSVVGMGGLGKTTLVKHVFDDLSVKMHFDCRSFVTVSQSYTMRELLIQMIKEFCKDSNEPITKGLQKMDHQKLITHVRQYLRSKRYLVLFDDVWKEKISDEIEHALISNNKGSRIIVTTRMMPVAEYFKKSFHVHVHKLRPLSPEKGWELFCNKAFRSEPGGQCPTELEEMSNEIVQKCGGLPLAIVAIGGLLSTKFKTMFEWIKLYQNLRMELERNVHLTDLVKILSISYDDLPYHLKACVLYFGIYPEDYTINSKRLTRQWMAEGFVRYEEKRNLEEVAGEYLTELIHRSLVQVSEVGFDGRVKSCQVHDVLREVIIRKMKDLSFCHLMHEYDEQVTVGMTRRLSITSISNNVLKNTKNSGICAIFVFNKGELPKDFMDGLSAKFKLLKVLDFENSLLNSVSDNFGNLFHLRYLNLSRTKVTVLPRSIGKLVNLETLDLRQTKVDKLPREINKLTKLRLLLAYYRRYEGHYSMLNFTIGVKMQEGIGCLKSLQKLYFLEADHGGIYLIEELKMLKQLRKLGIKRVRQEYGIALCAAIQEMKHLESLNIGAIAKDEILDLDLVSAPPHLRVLNLKCRLTKLPNWIPNLKYLVKLRLCLSKFEDDPLNSLKNLPNLSRLSLWDDAFYGERLHFQKGWFHKLKELDLTRLNRLSFVSIDREALLSLEHLRFNSNPQLKVLPEDLKNLKNLQFLGFADMPVELVNSIDHEKSGPCHWIINHIPLVQIRQNVGSKYHDYELYRIPTQFIV 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00204 943 Gene3D - 338 426 IPR042197 -
Tsu03g00204 943 SUPERFAMILY L domain-like 540 903 - -
Tsu03g00204 943 PANTHER - 32 893 - -
Tsu03g00204 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 440 IPR027417 -
Tsu03g00204 943 Coils Coil 24 51 - -
Tsu03g00204 943 Gene3D - 4 119 - -
Tsu03g00204 943 CDD RX-CC_like 2 126 IPR038005 -
Tsu03g00204 943 Gene3D - 166 332 IPR027417 -
Tsu03g00204 943 PRINTS Disease resistance protein signature 832 848 - -
Tsu03g00204 943 PRINTS Disease resistance protein signature 276 290 - -
Tsu03g00204 943 PRINTS Disease resistance protein signature 375 389 - -
Tsu03g00204 943 PRINTS Disease resistance protein signature 196 211 - -
Tsu03g00204 943 Gene3D Ribonuclease Inhibitor 543 904 IPR032675 -
Tsu03g00204 943 Gene3D - 427 518 IPR036388 -
Tsu03g00204 943 PANTHER DISEASE RESISTANCE PROTEIN RP 32 893 IPR044974 GO:0006952
Tsu03g00204 943 Pfam NB-ARC domain 178 429 IPR002182 GO:0043531
Tsu03g00204 943 Pfam Rx N-terminal domain 5 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00204 Tsu-Chr3 1650323 1654262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00204 193 386 WRKY Transcription Factor Family AT5G45050 25.773 3.12e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00204 K13457 - vun:114181831 1209.13