Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00167 ATGGCAGAAAGTGCAGTATTATCGGCCGTGGGGGAAGTGTTCCAACTtcttaagaaagaaaaaaatcttcTGCAAGGTGTACACACAGATTTTTTAGACATCAAAGACGAACTAGAAAGCATTCAAGTCTTCCTCAAAGATGCAGATAGAAGGGCAGCAGATGAAGCGGACACCAACGACGGAATAAGAACTTGGGTTAAGCATTTGAGAGAAGTTTCATTTCGCATTGAAGATGTCATTGATGAATACCTTCGGCAGATCCATACGACCAATCCTCCTGGATGCGGATCTTTATTCTGCAAGATTGCAAGCCTAAACAAAACTTTGATTCCCCGTCATAAAATTGCATCAGAGATTCAGGATATTAAGCTGTCAATTCGTGGAATCAAGGAAAGAAGTGAGAGGTATAACTTTCAAATTTCACATGAACAAGGTTCCTCAAGCAGCAGAAACAGCACTGGAGAGACAGAAAATGGAAGATGGCGTGATCCTCGACTGTCTTCCCTTTTCATTGAAGAAACTGAAATTGTAGGATTCGAAGGTCCAAGAGAAGAATTGTTTGGTTGGTTATTGGAAGGTGCATCTGAGCGAACAGTGATTTCAGTGGTAGGAATGGGAGGTATAGGAAAAACTACCCTCGCCAAGCTAGCTTTTGACAGCCCAAAGGTAACAACACAGTTTGATTGTCGCGCTTGCATCGCAGTTTCTCAGTCATACACTGTGAGAGGGTTACTGATAAACATGATGGAGCAATTTTGTCGGGAAACTCAAGACCCTCTTCCGCAAATTTTACACAAAATGGATGACAAGTCACTGATTATTGAAGTGAGGCAATACCTGCAAAATAAGAGgtatttgattttctttgatGATGTATGGCAAGAAGATTTTTCTGACCAGGTTGAATTTTCCATGCCTAATAACAATAACGGTAGCAGGATCATAATCACTACTAGAATGATGCATGTGGCAGATTTTTTCAAGAAATCCTTTCTAGTTCATGTTCACAACCTGCAACTTTTGCCTCCAAACAAAGCATGGGAACTCTTCTGCACAAAAGTATTTAGATTTGAACTTGGTGGGCAATGTCCGCCGGAGCTTGAAGTTGTATCAAAAGAAATTCTTAAAAAATGCAAGCAGCTACCGCTAGCAATTGTAGCCATTGGTGGTCTACTTTCAACAAAATCGAAAACAATGATTGAATGGCAAAAGGTTAGTCAAAACCTGAGCCTGGAGTTGGGACAGAATGCCCATTTAACAAGTCTAACAAAGATTTTGTCGCTTAGTTATGATGGCCTTCCTTACCACTTGAAAccatgcattttttattttggtatatatcCAGAGGACTATTCTATTAATCATAAGAGATTAACTCGACAATGGATAGCCGAAGGGTTTGTTAAATCTGATGAGAGACAAACTCCAGAGCAAGTTGCAGACAAGTACTTGTCTGAATTGATTCACAGAAGTCTAGTTCAGGTCTCAACTGTTGGCTTTGAAGGGAAAGTTAAAACATGCCGTGTCCATGATTTATTTCGGGAAGTGATCATTAGGAAAATGAAGGAATTTAGTTTTTGTCATTGCATGCAAGAAGATAGTGACTCAACCACAGTTGGAAACACTAGACGCCTATTNaaagtggtatcagagccccgttgtCTTCGGACTGTGTGGGTTATGTGTCAATCAGAGCAGGCCGTTCCTAAATCAGTTGGTGAGCTACAGAACTTAGAGACATTAGATTTAAGAGAAACACTTGTGCATGAACTACCACGTGAAATAAACAAGCTGGCAAAGCTACGACACCTTCTTGCTCTCCATCGTAACTATGAAGCAAACTATTCTCTTTTAGGCTTTACAACTGGTGTACGGATGGAAAAAGGTATTAAAAACATGACTTCCCTACAAAATCTTTATTATGTGGAGGTAGATCATGGCGGGGTAGATCTCATTCAAGAGATGAAAATGTTAAGGCAGTTAAGGCGGTTAGGTTTAAGGCATGTAAGAAGAGAACATGGAAATGCCTTATGTGCTGCAGTAGTAGAAATGAAACACCTTGAAAATCTTAATATCACTGCAATAACTGCAGATGAAACAATAAACTTGAACTTTGTCTCATCTCCACCCCAACTTCAGCGGCTTCATTTGAAAGCTAAATTAGATGCATTGCCTGATTGGATTCCAAAACTCGAGTATCTTGTTGAGATAAAGCTGGCTTTATCAAAGTTGAAAGAGGATCCGCTAATGTCACTGAAAAACTTGCCAAATCTGCTGAAGCTCAGTATGTGGGACAATGCCTACGATGGTGACATTTTGCATTTTCAAAATGGAGGGTTTctaaagttgaagaaactgaatcTGAGTCGCTTGAATAGAGTAAATTCTATCATTATAGAGAAGGGAGCTTTGCTCTctcttgaaaatattttaatggaCAAAATCCCCCAAGTGAAGGAAGTACCCTTTGGCATCAAGCACTTGGACAACCTCAAAGATATTATCTTCACTGATATGCCAGCTGAATTTTCTGAGAGCATTGATCCAGACAAAGGACAGCACTACTGGATTATCAAGCATGTACCTTTTGTATTCATTCGCCACTGGATTGGTCCAaacttatttgattttgatagtCACACCATTCACTCGTCTTCCTAG 2661 0.3811 MAESAVLSAVGEVFQLLKKEKNLLQGVHTDFLDIKDELESIQVFLKDADRRAADEADTNDGIRTWVKHLREVSFRIEDVIDEYLRQIHTTNPPGCGSLFCKIASLNKTLIPRHKIASEIQDIKLSIRGIKERSERYNFQISHEQGSSSSRNSTGETENGRWRDPRLSSLFIEETEIVGFEGPREELFGWLLEGASERTVISVVGMGGIGKTTLAKLAFDSPKVTTQFDCRACIAVSQSYTVRGLLINMMEQFCRETQDPLPQILHKMDDKSLIIEVRQYLQNKRYLIFFDDVWQEDFSDQVEFSMPNNNNGSRIIITTRMMHVADFFKKSFLVHVHNLQLLPPNKAWELFCTKVFRFELGGQCPPELEVVSKEILKKCKQLPLAIVAIGGLLSTKSKTMIEWQKVSQNLSLELGQNAHLTSLTKILSLSYDGLPYHLKPCIFYFGIYPEDYSINHKRLTRQWIAEGFVKSDERQTPEQVADKYLSELIHRSLVQVSTVGFEGKVKTCRVHDLFREVIIRKMKEFSFCHCMQEDSDSTTVGNTRRLXKVVSEPRCLRTVWVMCQSEQAVPKSVGELQNLETLDLRETLVHELPREINKLAKLRHLLALHRNYEANYSLLGFTTGVRMEKGIKNMTSLQNLYYVEVDHGGVDLIQEMKMLRQLRRLGLRHVRREHGNALCAAVVEMKHLENLNITAITADETINLNFVSSPPQLQRLHLKAKLDALPDWIPKLEYLVEIKLALSKLKEDPLMSLKNLPNLLKLSMWDNAYDGDILHFQNGGFLKLKKLNLSRLNRVNSIIIEKGALLSLENILMDKIPQVKEVPFGIKHLDNLKDIIFTDMPAEFSESIDPDKGQHYWIIKHVPFVFIRHWIGPNLFDFDSHTIHSSS 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00167 886 MobiDBLite consensus disorder prediction 140 161 - -
Tsu03g00167 886 PRINTS Disease resistance protein signature 573 589 - -
Tsu03g00167 886 PRINTS Disease resistance protein signature 199 214 - -
Tsu03g00167 886 PRINTS Disease resistance protein signature 378 392 - -
Tsu03g00167 886 PRINTS Disease resistance protein signature 279 293 - -
Tsu03g00167 886 PANTHER - 31 843 - -
Tsu03g00167 886 Gene3D - 164 333 IPR027417 -
Tsu03g00167 886 SUPERFAMILY L domain-like 545 846 - -
Tsu03g00167 886 CDD RX-CC_like 2 131 IPR038005 -
Tsu03g00167 886 Gene3D - 341 429 IPR042197 -
Tsu03g00167 886 Gene3D Ribonuclease Inhibitor 518 850 IPR032675 -
Tsu03g00167 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 443 IPR027417 -
Tsu03g00167 886 MobiDBLite consensus disorder prediction 140 155 - -
Tsu03g00167 886 Pfam Rx N-terminal domain 5 90 IPR041118 -
Tsu03g00167 886 Pfam NB-ARC domain 184 431 IPR002182 GO:0043531
Tsu03g00167 886 PANTHER DISEASE RESISTANCE PROTEIN RP 31 843 IPR044974 GO:0006952
Tsu03g00167 886 Gene3D - 4 116 - -
Tsu03g00167 886 Gene3D - 430 517 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00167 Tsu-Chr3 1379176 1389004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00167 200 397 WRKY Transcription Factor Family AT5G45050 27.586 8.50e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00167 K13457 - gmx:100801561 1198.73