Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00166 ATGGCAGAAACTGCAGTATTGATTGCTCTGGGGGAAGTGTTCCAATTCctaaaagaagaaacaaatctGCTCAGTGGTGTAAACAAAGATTTCTCAGACATCAAAGATGAACTTGAAATCATTCAAGTCTTCCTCAAAGATGCAGATAGAAGGGCAGCAGACGAAGCAGACACCAATGATGGAATAAGAACTTGGGTGAAGCATATGCGAGAAGTATCATTTCGAATTGAAGATGTCATTGATGAATATCTTCGGCTGATCCATAGGACCAATCCTCCTGGATGTGGATCTTTAGTCTGCAAGATTCCAAGCCTAATAAAATCTTCGATTCCCCGTCACAAAATTGCATCAGAGATTCAAGACATTAAGTTGTCCATTCGTGGAATCAAGGAAAGAAGCGACAGgtataaatttcaaatttcacaGATATCTGGATCATCCAGCAGCATCAACAGCATAGGAGAGACAGACAATAGAAGATGGCATGATCCTCGATTGTCTTCCCTTTTCATTGAAGAAACCGCAGTCGTCGGATTTGAAGGCCCGAGGGAAGAATTGTCAGGTTGGTTATTGGAGGGTGCAGCTGACCGAACATTGATTTCAGTGGTTGGAATGGGAGGTCTAGGAAAAACCACTCTTGCCAAGCTAGTTTTTGACAGTCAAAAGGTAGCAACAAAATTTGATTGTTGTGCTTGTATCACCGTTTCTCAATCATACACTGTTAGGGGGTTATTGATCAACATGATGGAGGAATTTTGTAGCGAAACAGAAAACCATCTTCTGCAGATGTTAAACAAAATGGATGACAAGTCATTGATTGTACAAGTGAGGCAATACCTGCAACATAAGAGGTATTTGATATTCTTCGATGATGTATGGCAAGAAGATTTTTCCGACCAGGTTGACTTTGCCATGCCTAATAACAACAAAGGTAGTAGGATCATAATCACCACTAGAATGATGCAAGTTGCAAATTTTTTCAAGAAATCCTTTCTAGTTCATGTTCACAACTTGCAATTTTTGCCTCCAAACAAAGCATGGGAACTCTTCTGCACAAAAGTATTTAGATTTGAACTTGATGGGCAATGTCCGCCGGAGCTTGAAGTTGTATCAaaagaaattgttaaaaaatgcAAGCAGCTACCACTAGCAATTGTAGCCATTGGTGGTCTACTTTcaacaaaatctaaaataatgATTGAATGGCAAAAGGTTAGTCAAAACCTGAGCCTGGAGTTGGGACGTAATGCCCATTTAACCAGTTTGACAAAGATTTTGTCGCTTAGTTATGATGGCCTTCCTTACTACTTGAAACCATGCattttgtattttggtatttaCCCAGAGGACTATTCTATCAATCATAACAGATTAACTCGACAATGGATAGCTGAAGGATTTGTTAAATCTGATGAGAGACAAACTCCAGAGCAAGTTGCAGACGAGTACTTGTCTGAATTGATTCACAGAAGTCTGGTTCATGTCTCAACTATTGGCTTTGAAGGGAAAGTCAAAACATGTCGAGTCCACGATTTATTTCGGGAAGTGATCATTAGGAAAATGAAGGATTTAAGTTTCTGTCATTGTGTGCATCAAGATATTGAATCAATCGCAGTTGGAAATACTAGACGCCTATCCATAGCCACTAATCCCAACAATGTGTTGAAGAGCGCTAAGAATTCACATTTTCGTGCTATTCATGTTTTTGAAAAAGATGGATCATTGGAGCATTTTATGGGTAAACTGTGTTCACAATCTAGGATTTTGAAGGTACTTGACATTCAAGGTACATCATTGACTCATATTCCTAAAAATTTGGGGAGTCTTTTCCACTTAAGGTACATAAACTTGAGTTATACAAATGTACATGCCCTTCCAAAATCAGTTGGTGAGCTACAGAACTTAGAGACGTTAGATTTAAGAGAAACACTTGTGCATGAACTACCATGCGAAATAAACAAGCTGGCTAAGCTACGACACCTCCTTGTTCTCCATCGTAACTATGAAGCAAATTATTCTCTTTTAGGCTTTACAACTGGTGTACGGATGGAAAAAGGTATTAAAAACATGACTTCCCTACAAAATCTTTGTTATGTTGAGGTTGATCATGGGGGGGTAGATCTCATTCAAGAGTTGAAAATGTTAAGGCAGTTAAGGCGGTTAGGTCTAAGGCGTGTACGAAGAGAACATGGGAATGCCTTAAGTTCTGCAATAGTAGAGATGAAACACCTTGAAAATCTTAATATCACTACAATAACTGCGGATGAAACAATAAACTTGAACTTTGTCTCATCTCCCCCCCAACTTCAGCGGCTTCATTTGAAAGCAAAACTGGATGCATTGCCTGATTGGATTCCAAAGCTTGAGTATCTTGTTGAGTTAAAGCTGGCTTTATCTAAGTTGAAAGATGATCCGCTAATGTCATTGAAAAACTTGCCAAATCTGCTGAAGCTCTGTATTTTGGACAATGCCTACGATGGTGAAATTTTGCACTTTCAAAATGGAGGGTTTctaaagttgaagaaactgaataTCAGTCGCTTGAATAAAGTAAATTCCATCATTATTGACAAAGGAGCCTTGCTTTctcttgaaaatattttaatgaacaAAATCCCCCAAGTAAAGGAGGTACCCTCTGGCATTAAGCACTTGGACAACCTCAAAGATATTTACTTCACTGATATGCCAGCTGAATTTGCTGAGAGCATTGATCCAGACAAAGGACAACACTACTGGATTATCAAGCATGTACCTCTTGTATTCATTCGCCACTGGGTTGGTCCAAACTTACTTGATTTTGATATTCGCACTATTCACTCATCTTCCAAGGAGTCACaaacaaattga 2850 0.3758 MAETAVLIALGEVFQFLKEETNLLSGVNKDFSDIKDELEIIQVFLKDADRRAADEADTNDGIRTWVKHMREVSFRIEDVIDEYLRLIHRTNPPGCGSLVCKIPSLIKSSIPRHKIASEIQDIKLSIRGIKERSDRYKFQISQISGSSSSINSIGETDNRRWHDPRLSSLFIEETAVVGFEGPREELSGWLLEGAADRTLISVVGMGGLGKTTLAKLVFDSQKVATKFDCCACITVSQSYTVRGLLINMMEEFCSETENHLLQMLNKMDDKSLIVQVRQYLQHKRYLIFFDDVWQEDFSDQVDFAMPNNNKGSRIIITTRMMQVANFFKKSFLVHVHNLQFLPPNKAWELFCTKVFRFELDGQCPPELEVVSKEIVKKCKQLPLAIVAIGGLLSTKSKIMIEWQKVSQNLSLELGRNAHLTSLTKILSLSYDGLPYYLKPCILYFGIYPEDYSINHNRLTRQWIAEGFVKSDERQTPEQVADEYLSELIHRSLVHVSTIGFEGKVKTCRVHDLFREVIIRKMKDLSFCHCVHQDIESIAVGNTRRLSIATNPNNVLKSAKNSHFRAIHVFEKDGSLEHFMGKLCSQSRILKVLDIQGTSLTHIPKNLGSLFHLRYINLSYTNVHALPKSVGELQNLETLDLRETLVHELPCEINKLAKLRHLLVLHRNYEANYSLLGFTTGVRMEKGIKNMTSLQNLCYVEVDHGGVDLIQELKMLRQLRRLGLRRVRREHGNALSSAIVEMKHLENLNITTITADETINLNFVSSPPQLQRLHLKAKLDALPDWIPKLEYLVELKLALSKLKDDPLMSLKNLPNLLKLCILDNAYDGEILHFQNGGFLKLKKLNISRLNKVNSIIIDKGALLSLENILMNKIPQVKEVPSGIKHLDNLKDIYFTDMPAEFAESIDPDKGQHYWIIKHVPLVFIRHWVGPNLLDFDIRTIHSSSKESQTN 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00166 949 Gene3D Ribonuclease Inhibitor 548 906 IPR032675 -
Tsu03g00166 949 PRINTS Disease resistance protein signature 630 646 - -
Tsu03g00166 949 PRINTS Disease resistance protein signature 199 214 - -
Tsu03g00166 949 PRINTS Disease resistance protein signature 378 392 - -
Tsu03g00166 949 PRINTS Disease resistance protein signature 279 293 - -
Tsu03g00166 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 444 IPR027417 -
Tsu03g00166 949 PANTHER DISEASE RESISTANCE PROTEIN RP 30 900 IPR044974 GO:0006952
Tsu03g00166 949 Pfam Rx N-terminal domain 6 91 IPR041118 -
Tsu03g00166 949 Pfam NB-ARC domain 184 431 IPR002182 GO:0043531
Tsu03g00166 949 PANTHER - 30 900 - -
Tsu03g00166 949 Gene3D - 430 521 IPR036388 -
Tsu03g00166 949 Gene3D - 4 116 - -
Tsu03g00166 949 CDD RX-CC_like 2 131 IPR038005 -
Tsu03g00166 949 Gene3D - 166 333 IPR027417 -
Tsu03g00166 949 SUPERFAMILY L domain-like 509 900 - -
Tsu03g00166 949 Gene3D - 341 429 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00166 Tsu-Chr3 1373625 1376638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00166 196 664 WRKY Transcription Factor Family AT5G45050 24.077 3.58e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00166 K13457 - gmx:100801561 1317.75