Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00102 ATGGCAACCAAGTTTACCCTTCTCTGCCTTCTCCTCACTTTTCTCACAATTGTAACTTCAACACCATCAAATTTCATAAAATCCTCATGTAGCACAACATCATACCCAACACTTTGTGTTGAATCACTCTCTAGCTATGCATCAACAATCCAACAAGATCCACACCAATTAGTTCAAACAGCTTTATCACTTAGCCTCAACAAAACTCAATCCACAAAAAGCTTTGTTACAAAATGCAAAAGTTTCAAGAATCTTAAACCAAGAGAATATGCTGCTCTTCATGATTGTGTTGAAGAAATTACTGATAGTGTTGATAGGCTTAGCCGTTCATTGAAAGAGCTTAAACTTTGCAAGATAAGTGGTCAAGATTTCAATTGGCATATAAGTAATGTTGAGACATGGGTTAGTGCAGCTTTGACTGATTCAAGCACTTGTAGTGATGGATTTGGTGGAAAAGCACTTGATGGAAGAATGAAAGCATCTATTAGATCTAGAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTTATCAACCAATATGCTACTAATCACTAG 564 0.3617 MATKFTLLCLLLTFLTIVTSTPSNFIKSSCSTTSYPTLCVESLSSYASTIQQDPHQLVQTALSLSLNKTQSTKSFVTKCKSFKNLKPREYAALHDCVEEITDSVDRLSRSLKELKLCKISGQDFNWHISNVETWVSAALTDSSTCSDGFGGKALDGRMKASIRSRMVNVAQVTSNALSLINQYATNH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00102 187 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 186 - -
Tsu03g00102 187 CDD PMEI-like_3 28 185 - -
Tsu03g00102 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 183 IPR035513 -
Tsu03g00102 187 Pfam Plant invertase/pectin methylesterase inhibitor 24 179 IPR006501 GO:0004857
Tsu03g00102 187 SMART PMEI_2 21 179 IPR006501 GO:0004857
Tsu03g00102 187 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 183 IPR006501 GO:0004857
Tsu03g00102 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 186 - -
Tsu03g00102 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00102 Tsu-Chr3 816565 817873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00102 26 180 Carbohydrate Esterase AT3G14310 29.487 2.70e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00102 - - gmx:100305900 280.796