Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00099 ATGGAAGCCAACACTTTTGCAAGTTTTTCTTCCATTCATGTTCTCACTTTTGCAATTTTCATCTTCCTAGCAATATCTAGCATCACTTTAGCATGTGATGAAAATTCTACAATACCTACCAATTCCACTAAAACCAACATTACCTACACTTACACTAGTCCCTCCAATTCCACccaaaaaaatgatttcaaaaccTATATTAAAAATTCATGCAATTCAACCACATATCCATATATATGCTACAAAGCTTTATCTCCATATGCTTCAAAAATTGAAGAGGATCCTTTAAAGTTATGCAACATATCTCTTTCGGTTGCGTTAAAGGCGGCTCGCGGTGCATCCTCGGCCGTATCGAAGCTTCTAAACAACAATGACAATAAATTATCAAGCATTGGTGAAGAAGTTGTTCAAGATTGCTTTAGCAATTTGAAGGATTCAATAGAACAATTGCAAGATTCTCTTGATGCCATGACAAATTTAGATGCTGAATTTGATAGAGAATTTCAAATTAGTAACATGAAGACTTGGGTTAGTTCTGCTATTACTAATGATCAAACTTGCTATGATGGATTTGATGAGATGAATGTGGATTCAACAATTAGGGACAAAATCAGAAGTAGAGTTTTGAGTGTGGCAAGGAAGACTAGCAATGCTTTGTATTTTATCAACAAtaacatatattaa 684 0.3319 MEANTFASFSSIHVLTFAIFIFLAISSITLACDENSTIPTNSTKTNITYTYTSPSNSTQKNDFKTYIKNSCNSTTYPYICYKALSPYASKIEEDPLKLCNISLSVALKAARGASSAVSKLLNNNDNKLSSIGEEVVQDCFSNLKDSIEQLQDSLDAMTNLDAEFDREFQISNMKTWVSSAITNDQTCYDGFDEMNVDSTIRDKIRSRVLSVARKTSNALYFINNNIY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00099 227 Pfam Plant invertase/pectin methylesterase inhibitor 66 219 IPR006501 GO:0004857
Tsu03g00099 227 SMART PMEI_2 62 221 IPR006501 GO:0004857
Tsu03g00099 227 CDD PMEI-like_3 70 224 - -
Tsu03g00099 227 Coils Coil 140 160 - -
Tsu03g00099 227 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 224 IPR035513 -
Tsu03g00099 227 PANTHER PECTINESTERASE INHIBITOR 4 8 225 - -
Tsu03g00099 227 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 225 IPR035513 -
Tsu03g00099 227 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 225 - -
Tsu03g00099 227 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 224 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00099 Tsu-Chr3 800640 801323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00099 67 224 Carbohydrate Esterase AT1G53830 27.215 3.13e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00099 - - gmx:100527443 270.781