Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00068 ATGGGTTCACTCGATGCACCAATCAGTGCGGAAAACGGCACCGTTCCGGCCGCCGGCCACGGCAAATCTCCGTTAACAGATGGCGGCATACGCGCCCCACCTTCAGATTCGGTACCGGAGTACGACGCATCTAAGCGGCGGAGATCGTCTGTGCTTCCTCTGGAAGTTGGAACGCGCGTGATGTGTCGTTGGAGAGACGGGAAGTATCATCCTGTCAAAGTCATCGAACGTCGCAGAGTTCATGGTGGACCCAACGAGTATGAGTATTATGTTCATTATACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGACCAGCTTGATCTTGATTCTGTGGAGGCAGTTGTTGATGAGAAAGTGGAGGAGAAGGGGGCATCAGGTTTGAAGATGACACGCCACCAAAAGAGGAAGATTGATGAGACACATGTTGAGGGCCATGAGGAGCTTGATGCTGCTAGTTTGCGAGAACATGAGGAGTTTACAAAAGTGAAAAACATAGCTACTATTGAACTCGGAAGATATGAGATCGAGACATGGTACTTCTCCCCATTCCCATCAGAATACAATGACTGTTTGAAGCTGTTCTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAGCAGCTTCAGAGGCATATGAAAAAATGTGATCTTAAGCATCCCCCTGGTGATGAGATATACAGAAGTGGTACACTGTCGATGTTTGAGGTTGATGGCAAGAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTAGCCAAGTTATTCCTTGATCACAAGACCCTCTATTATGATGTTGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGAACGAGGATGCCACATGGTCGGATATTTTTCGAAGGAAAAACATTCTGAGGAATCTTACAATCTGGCATGTATCCTCACCCTTCCACCTTACCAAAGGAAAGGTTATGGAAAATTTCTAATTGCTTTCTCATACGAACTTTCGAAGAAGGAAGGAAAAGTTGGCACTCCTGAAAGACCCCTTTCTGATCTTGGACTCCTAAGCTACAGAGGGTATTGGACCAGGGTTCTTTTAGACATTCTGAAAAAGCATAAGGGAAACATTTCCATCAAGGAGCTGAGTGATATGACTGCTATCAAAGCTGAAGATATATTGACAACTCTTCAAAGCTTAGAACTGATTCAGTACAGGAAAGGGCAGCATGTGATTTGTGCGGATCCAAAAGTTTTGGATCGCCACCTCAAAGCGGCTGGCAGAGGGGGTCTCGATGTTGATGTTAGCAAATTGATTTGGACACCTTACAAAGAACAAAGTTGA 1320 0.4477 MGSLDAPISAENGTVPAAGHGKSPLTDGGIRAPPSDSVPEYDASKRRRSSVLPLEVGTRVMCRWRDGKYHPVKVIERRRVHGGPNEYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGASGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPSEYNDCLKLFFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDERGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00068 439 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 12 439 - -
Tsu03g00068 439 Pfam RNA binding activity-knot of a chromodomain 54 111 IPR025995 -
Tsu03g00068 439 SMART chromo_7 68 126 IPR000953 -
Tsu03g00068 439 Pfam MYST family zinc finger domain 165 219 IPR040706 -
Tsu03g00068 439 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 163 434 IPR002717 GO:0004402|GO:0006355|GO:0016573
Tsu03g00068 439 SUPERFAMILY Chromo domain-like 48 164 IPR016197 -
Tsu03g00068 439 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 164 435 IPR016181 -
Tsu03g00068 439 Gene3D - 164 220 - -
Tsu03g00068 439 Gene3D - 342 422 IPR036388 -
Tsu03g00068 439 PANTHER HISTONE ACETYLTRANSFERASE 12 439 - -
Tsu03g00068 439 Gene3D - 222 434 - -
Tsu03g00068 439 Gene3D - 43 163 - -
Tsu03g00068 439 Pfam MOZ/SAS family 224 401 IPR002717 GO:0004402|GO:0006355|GO:0016573
Tsu03g00068 439 CDD CBD_MOF_like 57 125 - -
Tsu03g00068 439 MobiDBLite consensus disorder prediction 1 49 - -
Tsu03g00068 439 CDD NAT_SF 274 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00068 Tsu-Chr3 560907 566242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00068 4 439 C2H2 Transcription Factor Family AT5G64610 85.584 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00068 K11308 - gmx:100819168 823.542