Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00053 ATGGATTCTAAGAGACCACTTTTGTTACAATCACCAAGAACACCAAATGATCAAGAGTTTCCAACAATTCCAGTTTTTCCTGAGCTACCAAAATCAAAGTCAAGTTCAAGCAATACAGTAACATTTTCTGGTGTTGAATATGGTCAACAAGTTGATAACAAAACCTCTTCAAactcatcaacatcatcaagtaAAAGTGCCATGTCAATTCATTCAATGAGTTCAAGCAAGAGGAACAATAGTTTAAATCATTCAGGATCAAAGAAGCCTGTGACTGTGAGATATGGTTCAAAAGGTGGTGGTGATTCTGATGGATTGACTATGTCACAAAGGGAACTTAGAGATGAAGATGCAAGATTGGTTTATATCAATGATCCTGAGAAAACCAATGAGAGTTTTGAATTTTTCGGAAATTCAATAAGAACTGCTAAATACTCAATTCTTACTTTCATTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATGTATATTTTCTCATCATTGCTATTCTCAATCAGCTTCCTCAACTTGCAGTTTTCGGAAGATATGTTTCGATTCTACCGTTAGCTTTCGTTCTGTTTGTTACCGGTGTGAAAGATGCTTTCGAGGATTGGAGGAGACATAATTCAGATAAAGTTGAGAACAACAGGTTAGCATCAGTTTTGATTCATGATGGTAGTTTCATAGACAAGAAATGGAAAGATATTAGAGTTGGTGAGAttgtaaaaatcaaaacaaatgaaACAATTCCTTGTGATATTGTTTTGTTGTCAACTAGTGATCCCACTGGTGTTGCATATGTGCAAACTATTAATCTTGATGGTGAGTCTaatttgaaaactcggtatgcGAAACAAGAGACAGGTTCAAAGGTTCAACCGAGGTATACTGGTTTAATTAAGTGCGAGAAACCGAATAGGAATATTTATGGATTTATGGCAAATATGGAAATTGATGGTAAAAAGTTATCACTTGGATCAACCAACATTGTTCTTAGAGGATGTGAGCTCAAGAATACTAGTTGGGCACTTGGTGTCGCGGTTTATTGTGGCCGTGATACCAAAGCTATGCTCAACAGTTCAGGAGCTCCATCGAAAAGAAGTAGGCTCGAGACACGGATGAATTATGAAATCATTATGCTGTCTTCCTTTCTTGTTGCGTTGTGTACGATCACATCGGTTTGTGCTGCAGTTTGGTTGAAGCGCCATAAGGACGAGCTGAATTTGTTGCCTTATTATAGGAAACTTGATTTTTCGAAACCGAAAGTTGAAGACTATAAGTACTATGGATGGGGATTGGAAATCTTTTTCACATTCCTTATGTCAGTTATAGTTTATCAAGTCATGATTCCTATTGCTTTGTACATTTCTATGGAGCTTGTTCGCGTTGGCCAGGCCTATTTCATGATCGAAGACCATCGGTTGTATGATGAGGCTACCGATTCAAAATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTGGGGCAAATTAAGTATGTGTTCTCAGATAAAACTGGTACACTTACTGAGAATAAGATGGAGTTTCAATGTGCTAGCATTTGGGGAGTTGATTACAGTTCCACAAAAGCCAGCATGGATGGTGAGCAAGGTGAATACTCAGTGCAAGTTGATGGAAAGATGTTGAAGCCAAAAATGAAAGTGAAAGTTAATCCAGAGCTTTTGAAATTGGCAAGAAGTGCAGTTGAAAACGCGGAAGGAAAAAGGATCTATGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTCTTGTTGTTGACACGCCTGATTCTGATGTTAAGCTGTTAGATTACCAAGGTGAATCACCAGATGAACAAGCATTGGCGTATGCCGCTGCAGCCTACGGTTTTATGCTTATCGAACGAACCTCTGGCCACATTGTCATCGATATTCATGGAAAAAGACTAAAGTTCAATGTCTTGGGTTTACATGAATTTGACAGTGATAGAAAAAGGATGTCAGTTATATTAGGCTACCCGGACAACTCAGTAAAACTCTTCGTCAAGGGAGCAGACACAACAATGTTTAATGTAATAGACAAATCATACAACATGGACTTAATAAAATCCACAGAAACTCATCTTCACTCATATTCATCGCTCGGTTTAAGAACACTTGTTATCGGAATGAAAGAACTCAACACTTCGGAGTTTGAACAATGGCATGCAGCCTATGAAGCTGCAAGCACTGCGGTTTTTGGTAGGGCTGCAATGCTCAAAAAGATTTCAAACAATGTTGAAAACAATGTTTGTATTCTTGGAGCTTCTGCTATTGAAGATAAACTTCAACAAGGCGTGCCGGAAGCTATTGAGTCTCTAAGAGCAGCAGGGATTAAAGTTTGGGTTTTGACTGGTGACAAGCAAGAAACTGCTATATCTATCGGATTCTCGTCAAAACTTTTAACAAGAAACATGACTcaagttattattaatagtaataatagaGTTTCATGTAGAAAAAATCTCAAAGATGCTCTTGAAAGGTCCAGAAAACTTATGTCTACATATGGTGTTGGCAACAATGATGGAGCAGTTGCAAATCAGATAGCTTTGATTATTGATGGTGGAAGCCTTGTGCACATTCTTGATAGTGAACATGAAGAAGAGCTATTTCAACTTGCAAGTTTGTGTTCCGTTGTTCTTTGTTGTCGAGTTGCTCCACTGCAAAAGGCCGGTATTGTTTCCCTTGTGAAGAATAGGACATCTGACATGACACTAGCCATTGGAGACGGTGCTAATGACGTGTCAATGATTCAAATGGCTGATGTTGGAGTTGGTATCAGTGGACAAGAGGGTAGACAAGCTGTAATGTCGTCCGATTTTGCAATGGGACAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTACCAAAGACTTGGTTACATGATACTATACAATTTCTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCATTCACTTTAACAACTGCTATAAATGAATGGAGTTCGACATTATATTCGATAATCTACAGTGCACTACCAACTATTATTGTTGGAATTCTTGACAAAGATCTTGGTAGAAGCACTCTCCTAAAGTTTCCTCAACTTTATAGTGCTGGTCAAAGAGATGAAGCCTACAACAAGAAATTGTTTCTGCTAACAATGGCTGATACTTTGTGGCAAAGTATGGTTATCTTTTGGCCACCACTCTTTGCATATTGGAAAAGTACTATTGATATAGCAAGCATAGGAGATCTTTGGACTCTCGCGACAGTTATTTTGGTCAATTTACACTTGGCTATGGATGTTGTTAGATGGTATTGGGTTACTCATGCTGTCATTTGGGGATCTATTGTTGCAACTTTCATTTCTGTCATGATCATTGATGCTATACCTCAACTTCCTGGTTACTGGGCTTTCTTTCATGTTTCAAGCAGTGGATTGTTTTGGGCATTGTTGCTAGGAATTGTGATAGCAGCATTACTTCCACGTTTggttataaaatttatttatcaatattattttcCTAGTGATATTCAAATTTCTAGAGAAGCTGAAAAGATGAAACAATATCAAAGAGTTGCTGAAAATGGACAAATTGAAATGCTTCCTATCTCAGATCATCAACAACATAGATAA 3669 0.3699 MDSKRPLLLQSPRTPNDQEFPTIPVFPELPKSKSSSSNTVTFSGVEYGQQVDNKTSSNSSTSSSKSAMSIHSMSSSKRNNSLNHSGSKKPVTVRYGSKGGGDSDGLTMSQRELRDEDARLVYINDPEKTNESFEFFGNSIRTAKYSILTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRYVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLASVLIHDGSFIDKKWKDIRVGEIVKIKTNETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETGSKVQPRYTGLIKCEKPNRNIYGFMANMEIDGKKLSLGSTNIVLRGCELKNTSWALGVAVYCGRDTKAMLNSSGAPSKRSRLETRMNYEIIMLSSFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSKPKVEDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDHRLYDEATDSKFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKASMDGEQGEYSVQVDGKMLKPKMKVKVNPELLKLARSAVENAEGKRIYDFFLALATCNTIVPLVVDTPDSDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGKRLKFNVLGLHEFDSDRKRMSVILGYPDNSVKLFVKGADTTMFNVIDKSYNMDLIKSTETHLHSYSSLGLRTLVIGMKELNTSEFEQWHAAYEAASTAVFGRAAMLKKISNNVENNVCILGASAIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGFSSKLLTRNMTQVIINSNNRVSCRKNLKDALERSRKLMSTYGVGNNDGAVANQIALIIDGGSLVHILDSEHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIIYSALPTIIVGILDKDLGRSTLLKFPQLYSAGQRDEAYNKKLFLLTMADTLWQSMVIFWPPLFAYWKSTIDIASIGDLWTLATVILVNLHLAMDVVRWYWVTHAVIWGSIVATFISVMIIDAIPQLPGYWAFFHVSSSGLFWALLLGIVIAALLPRLVIKFIYQYYFPSDIQISREAEKMKQYQRVAENGQIEMLPISDHQQHR 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00053 1222 Gene3D - 200 361 - -
Tsu03g00053 1222 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 510 776 IPR023299 GO:0000166
Tsu03g00053 1222 SUPERFAMILY HAD-like 491 960 IPR036412 -
Tsu03g00053 1222 MobiDBLite consensus disorder prediction 29 90 - -
Tsu03g00053 1222 SFLD C1.7: P-type atpase like 487 970 - -
Tsu03g00053 1222 Pfam E1-E2 ATPase 223 462 - -
Tsu03g00053 1222 PRINTS P-type cation-transporting ATPase superfamily signature 919 938 - -
Tsu03g00053 1222 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Tsu03g00053 1222 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1220 - -
Tsu03g00053 1222 Pfam Phospholipid-translocating P-type ATPase C-terminal 947 1187 IPR032630 -
Tsu03g00053 1222 Pfam Cation transport ATPase (P-type) 603 687 - -
Tsu03g00053 1222 Pfam Phospholipid-translocating ATPase N-terminal 121 188 IPR032631 -
Tsu03g00053 1222 Gene3D - 609 740 IPR023299 GO:0000166
Tsu03g00053 1222 SFLD p-type atpase 487 970 IPR044492 -
Tsu03g00053 1222 MobiDBLite consensus disorder prediction 1 110 - -
Tsu03g00053 1222 PRINTS Sodium/potassium-transporting ATPase signature 996 1016 - -
Tsu03g00053 1222 PRINTS Sodium/potassium-transporting ATPase signature 497 518 - -
Tsu03g00053 1222 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 889 1005 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu03g00053 1222 CDD P-type_ATPase_APLT_Dnf-like 137 1077 - -
Tsu03g00053 1222 Gene3D - 760 959 IPR023214 -
Tsu03g00053 1222 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1220 - -
Tsu03g00053 1222 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Tsu03g00053 1222 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 135 1194 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tsu03g00053 1222 SUPERFAMILY Calcium ATPase, transduction domain A 223 358 IPR008250 -
Tsu03g00053 1222 SUPERFAMILY Calcium ATPase, transmembrane domain M 137 1186 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00053 Tsu-Chr3 459671 465222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00053 75 1217 Primary Pumps ATPases AT5G04930 68.467 0.0 1656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00053 K14802 - gmx:100813982 1891.7