Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00025 ATGGATTCCTCAACAAACAACAACGGAGACAAGGTAATAGTCCACAACCTATTCCCCCACATAGTTGTCTATAGTGACGGTACCATAGATCGTCCAAGAAACTATCCAATTGTTCCACCACAAGAAGAGGACCCTGAAACCGACGTCTCATCCAAAGACATTGTCTTTTCCAATGACCCTTACCTCACTGCTAGACTTTACCTTCCAAAACCAACACAAACCAACGATCAAAACCAAAAACTCACCATCTTGGTTTATTTTCATGGTGGTGCATTCACCTATGAATCAGCATTTTCATCCATCCACCATGCAAATTGCAATCTCTTAGCTTCTCAAGCAAATGTTGTGATTGCTACCATAGAACATAGAAAGGCTCCAGAGTATTATCTTCCTACAGCTTATAATGATTGTTGGGTTGGTCTCTGTTGGGTTGCTTCTCATGCAACTCAAAATCCCATAAACAGTGACCCTTGGATCACCAATCATGGTGATTTTAACAGAATTTTCATTGGTGGTGATAGTAGTGGTGGCAACCTTGTTCACAATGTTGCTATGCGTGCCGGTGTTGAAGCTTTACCTGGCGGTGTCAAACTACTTGGTGCTTATCTTAACCACCCTTGCTTATGGGGTGCAAAACCAATAGGGAAGGAACCTGTTATAGGATTTGAGGAGACTCTTCAATCTAGGATTTGGAAGTTTGCTTACCCTTCTGCTCCTGGTGGGTTAGATAACCCTATGCTCAATCCATTGGCTTCTGGAGCACCAAGTTTGGCTACAATTGGTGGTTCTAGGCTACTTATTACTGCTGCTGGCCAGGATCACCTTTTCTTTAGGGACAGAGCCAAAAGATATTACGAGGCTGTGAAGGAGAGTGGGTGGAAAGGGGAAGTCGAATTCTTTGAAGAGAAAGATGAGGATCATGCATATCACATGTTTGATCCTAATTCAGAGAAATCTAAAAGATTGATAAAAGTTGTGGTTGATTTTCTTCGCCGCTAA 999 0.4234 MDSSTNNNGDKVIVHNLFPHIVVYSDGTIDRPRNYPIVPPQEEDPETDVSSKDIVFSNDPYLTARLYLPKPTQTNDQNQKLTILVYFHGGAFTYESAFSSIHHANCNLLASQANVVIATIEHRKAPEYYLPTAYNDCWVGLCWVASHATQNPINSDPWITNHGDFNRIFIGGDSSGGNLVHNVAMRAGVEALPGGVKLLGAYLNHPCLWGAKPIGKEPVIGFEETLQSRIWKFAYPSAPGGLDNPMLNPLASGAPSLATIGGSRLLITAAGQDHLFFRDRAKRYYEAVKESGWKGEVEFFEEKDEDHAYHMFDPNSEKSKRLIKVVVDFLRR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00025 332 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 9 331 - -
Tsu03g00025 332 Gene3D alpha/beta hydrolase 17 332 IPR029058 -
Tsu03g00025 332 PANTHER ARYLACETAMIDE DEACETYLASE 9 331 - -
Tsu03g00025 332 Pfam alpha/beta hydrolase fold 84 311 IPR013094 GO:0016787
Tsu03g00025 332 SUPERFAMILY alpha/beta-Hydrolases 20 332 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00025 Tsu-Chr3 247922 248920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00025 10 331 Carbohydrate Esterase AT3G48700 34.545 7.04e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00025 - K13258 gmx:100814777 448.743