Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00022 ATGGTTAACCCTTGTGCTCCTGGTGCACCAAGTTTGGCTACACTTGGTTGTTCTAAGATACTAGTTACTATTACTGATAAGGATGAGTTTAAAGACAGAGATATTTTGTACTATGAGTCTGTCAAAAGAAGTGAGTGGCAAGGTCAAGTTGAATTGTTTGAAGGTGGAGATGAGGCACATGGTTTCCAGATCTTCAAACCTGAAACTGATAGAGCTAAACAAATGATCAAACGTTTggcttcttttcttgtttga 255 0.3569 MVNPCAPGAPSLATLGCSKILVTITDKDEFKDRDILYYESVKRSEWQGQVELFEGGDEAHGFQIFKPETDRAKQMIKRLASFLV 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00022 84 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 1 83 - -
Tsu03g00022 84 PANTHER ARYLACETAMIDE DEACETYLASE 1 83 - -
Tsu03g00022 84 Gene3D alpha/beta hydrolase 1 84 IPR029058 -
Tsu03g00022 84 SUPERFAMILY alpha/beta-Hydrolases 11 83 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00022 Tsu-Chr3 222489 222743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00022 12 83 Carbohydrate Esterase AT3G48700 32.877 4.10e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00022 - K13258 gmx:547489 132.494