Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00019 ATGGAACATACTACGATGCTACAAACCATTGTGACTGTGCTTCTTCTCCTTATGCTTCTTATCATCTTCATTttcctcttctttctcttcaaaCCATGGcgcttctttttctcttctcgctttcgttcttcttcttccatcatcaacaacaacaagGGTTCTATGGGTAGTGAATTAGAAAGACCACTTGTTGAAGACGATTTAAATGCTTCTTCTTATAATAATCAGCATAATCATCATGAATTACCTAGAGATTATGATCTTGAAGGTGCGTGTTATCCTAATGAACTTAATTTTCGTTCTCCAAGAACACATGGACAAGGATTAGTTCATAAACAAAGGCTTCATAATCATTCTTCTGTTTCACCTAATTTTCCACAAGgtgttgttggtggtggtggtgatacTTTGATTGTTGATGTTATCTCTGATCATCATCATTCTTCTGAAGATGTTGCTACTGATGCTCAAGTATTTAAGCTACTTCCTCCACCTCTTTTAGctcaaattcatcaaaaacCTAATCATATTAATTATCAGAATGATACTAGATTGCAAGATTTTGTGCAAAGAGATATCACTGATCAAAGAAGTTGCCTCACTTTGGAGGTTATCAGCGGTCCTTCTTGCGGATTACGATGTTCCGTGCAGTCGACAAATCCCACTCGTCTACCGCTGACGCTGGGTAGGGTTTCTCCTAGTGATTTGTTGATAAAGGACTCGGAGGTGTCGGGAAAGCATGCTTTGATTAAGTGGAATTTGGATAATATGAAATGGGAGTTGGTGGATATGGGTAGCTTGAATGGAACACTTTTGAATTCTAAGTCAATCAACCATCCTGACACTGGAAGTAGGCATTGGGGAGATCCAATGATTCTTGCTAATGGAGATGTTATAACTCTTGGAACAACATCAAAAATAATTGTTCATATTACTtcacaaaatcatcatcacattCCCTTTGGAGTTGGTATGACATCAGATCCCATGGCTTTGCGTCGAGGAGGAAAAAAACTTCCTATGGAGGATGTTTGCTATTATCAATGGCCTCTACCCGGACTGGATCAGTTTGGTCTTTTTGGCATTTGTGATGGGCACGGTGGTGATGGGGCTGCCAAATCTGCTAGCAAGTTAGTATTTTCTGTCTTAGGTCAGCCATTATTGATGGTTGCCATTTTAATGAAACTCATAGGCTAA 1197 0.3467 MEHTTMLQTIVTVLLLLMLLIIFIFLFFLFKPWRFFFSSRFRSSSSIINNNKGSMGSELERPLVEDDLNASSYNNQHNHHELPRDYDLEGACYPNELNFRSPRTHGQGLVHKQRLHNHSSVSPNFPQGVVGGGGDTLIVDVISDHHHSSEDVATDAQVFKLLPPPLLAQIHQKPNHINYQNDTRLQDFVQRDITDQRSCLTLEVISGPSCGLRCSVQSTNPTRLPLTLGRVSPSDLLIKDSEVSGKHALIKWNLDNMKWELVDMGSLNGTLLNSKSINHPDTGSRHWGDPMILANGDVITLGTTSKIIVHITSQNHHHIPFGVGMTSDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLVFSVLGQPLLMVAILMKLIG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00019 398 Pfam FHA domain 227 302 IPR000253 GO:0005515
Tsu03g00019 398 SMART FHA_2 225 277 IPR000253 GO:0005515
Tsu03g00019 398 PANTHER PROTEIN PHOSPHATASE 2C 70 46 385 - -
Tsu03g00019 398 ProSitePatterns PPM-type phosphatase domain signature. 359 367 IPR000222 GO:0043169
Tsu03g00019 398 ProSiteProfiles Forkhead-associated (FHA) domain profile. 226 277 IPR000253 GO:0005515
Tsu03g00019 398 Gene3D - 194 329 - -
Tsu03g00019 398 Gene3D - 330 389 IPR036457 -
Tsu03g00019 398 SUPERFAMILY SMAD/FHA domain 198 309 IPR008984 GO:0005515
Tsu03g00019 398 CDD FHA 200 305 IPR000253 GO:0005515
Tsu03g00019 398 SUPERFAMILY PP2C-like 334 385 IPR036457 -
Tsu03g00019 398 PANTHER PROTEIN PHOSPHATASE 2C 46 385 IPR015655 GO:0004722|GO:0006470
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00019 28 387 PP2C-type Phosphatase Gene Family AT5G19280 50.272 3.24e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00019 K01090 - gmx:100170642 466.848