Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05656 ATGGCTTTGTTTAGTTCTATTACAATAGTGTGTGcactttttttcttcctatGCGTCATCTTCCAATTACATAGAAAACGATTTTGTAGATACCCCATCTTCATAGATTATCCTTTTCTAGGCATGTTTCCTCCCCTCCTTTTAAACTTGTGGCATATTCATGATTTCCTAACTGAGTTATTGAAAAAACAACATAGGAGCACTGGTGAGTTCATGGGACCTTGGTTTACCAAAATGAACTATTTAGTCACCAGTGACCCTATCAATGTGCATCACATAATGAGCAAATGTTTTGCAAATTATGTTAAGGGTCATGAGTTTCATGAGATTTTTGAATCCTTTGGAGATGGAATATTCAATGCGGATTCGGAGACATGGAAATACAATAGGTCACTTTTTCACTCTATTTTCAAATTGAGAGATTTTGAATTGTTTCAAGAGAAAGTTATTCGAAACAAGTTGGAGAGAAGCTTGATTCCTATATTGGATCATGTTCAACAAAAAGGATCAGTGGTGGATCTACAAGATGTCTTCAATCGTTTCACATTCGACAATATTTGTTTAGTGGTTCTCGGATGTGATCCTAATTGTCTTTCGATTGATTTCCCTGATGTCGCGTGTGAGAAGGCTTTTGACCAAATTGAAGAATGCATATTCTATAGACATGTTATTCCAAAAGGTGTTTGGATATTGCAAAAATTTCTTCAAGTTGGCCAAGAGAAAAAGATGACCAAAGCATCCAaagaatttgatgaatttatataTGCAAACATAGAGTCCAAAAGAGAGGAGCTAAGAAAAGGtataaaaaatgatgaaatggGAGACTTGTTAACAACTTTtatgaaaaaagagaaagagtCACAAGTAGTAGTACATGATGACAAGTTTCTAAGGGATGCTGCATTCAATCTCTTTGTAGCTGGGAGAGATACTATAACTTCGGCGCTTACATGGCTATTTTATCTTGTAGCTACACACCCTTTAGTAGAAACCAAGATTCTCGAAGAGATTAAAGAAAATTTTGGGAGcattaatattgaaaagaaaataggGGTTGATGATGTGAAAAATCTAGTTTATCTTCATGGTGCTATATGTGAGGCTATAAGGCTTTTTCCTCCAATACCCTTTGAGAGAAAGCAAGCAATTGAAGGTGATATACTTCCAAGTGGCCACATTGTTAATCCAAAtacaattatattattttctttgtattCAATGGGTAGACTTGAAGAGACATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATGTCGGAGAGAGGAGGCATTGTTCATAATCCATCTTATAAGTTCTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAAGGACTTGTCCTTTATTCAAATTAAGATGATATCAATTGCTATTTTGTGCAAGTATCGTGTCCAATTGGAGGAAGGTCATGTTCCTTCATTAAGCCATTCAATTGTACTTCTTATGAAGAATGGTTTCAAGtCCTTCCTTTCTTTTTGGATTGGAtctgaaaaaaacaaaagaagagtgTTGAGTCCACTTCCTTCATTTGTCTTCATTCTGTCGTTGCTCCAAAAACAAAGTCACTTCACTTTTctgGAATCAACAAATGAAACAACAATTCTCACTCTTCATCTGCATTGCCATTTCTCATCTCTGACCAGGTACATTCTTTCTCCATTTACTGTAACAATGGAATAG 1713 0.3363 MALFSSITIVCALFFFLCVIFQLHRKRFCRYPIFIDYPFLGMFPPLLLNLWHIHDFLTELLKKQHRSTGEFMGPWFTKMNYLVTSDPINVHHIMSKCFANYVKGHEFHEIFESFGDGIFNADSETWKYNRSLFHSIFKLRDFELFQEKVIRNKLERSLIPILDHVQQKGSVVDLQDVFNRFTFDNICLVVLGCDPNCLSIDFPDVACEKAFDQIEECIFYRHVIPKGVWILQKFLQVGQEKKMTKASKEFDEFIYANIESKREELRKGIKNDEMGDLLTTFMKKEKESQVVVHDDKFLRDAAFNLFVAGRDTITSALTWLFYLVATHPLVETKILEEIKENFGSINIEKKIGVDDVKNLVYLHGAICEAIRLFPPIPFERKQAIEGDILPSGHIVNPNTIILFSLYSMGRLEETWGKDCLEFKPERWMSERGGIVHNPSYKFFSFNAGPRTCLGKDLSFIQIKMISIAILCKYRVQLEEGHVPSLSHSIVLLMKNGFKSFLSFWIGSEKNKRRVLSPLPSFVFILSLLQKQSHFTFLESTNETTILTLHLHCHFSSLTRYILSPFTVTME 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05656 570 Pfam Cytochrome P450 45 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 500 - -
Tsu02g05656 570 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 PANTHER CYTOCHROME P450 11 500 - -
Tsu02g05656 570 SUPERFAMILY Cytochrome P450 37 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g05656 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Tsu02g05656 570 Gene3D Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05656 Tsu-Chr2 64803566 64811319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05656 1 498 Cytochrome P450 AT2G23180 44.990 8.58e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05656 - - aprc:113867564 680.248