Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05655 ATGGAGTCACGTTCGCGTATCAATGCAGTTGAATCTATATCAGAGGTTCAGAATTCAGTTTCTGGAGTACCGATACGCCACAGCCTTCCTTTAACTTCAGGGAATCCTCGTCCTTCGAGGCCTCCCTTATATAGAAATAACGGCGCAGCTTCTTCTTCCACATGCTTTTTGGAACAAAGACATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTTTGTAATTAATCAGAAGCATTCATATCAAGACAGAAACAATGAAGGATTGCCAACAAAATTATGCAGCAAGCAACTGTTTGGCAATGATTCAAAGAATTGTGACTCAAGTTTTGCAGTATTACAATCTGACAATTGTATCTTAGTTCCATCAAAACGAGCCGTTGTTAATCAACCAAAGACTTACCATTGTCAGTCAGAGATTAGTTTTTGTCCTAGTCCTCAGAGTAGTTTCTATTCAGCCACTCTATATTCGGAAGCGAAACAAAGTTTCACCAATACTGAAGTCAGTGAATGCGTTAGTGTTGATAATAAGTCGTATGAAAGCGGAGAAGTTTCGACTTCTTGTGATTTTAATGATAGTAGGAAAACCAGCATATGCAGAGGGAGTACCGGAAGTGATGTTAGCGACGAAAGCAACACGAGTAGTTTGAGCAGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTATCCGAGCACGTGACGGGATGTTGGAAATGAGGCATTTTAGGTTGTTGAAGCGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCAGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACTGAGCTCGCAAGTCGCAAGAAGCTTCTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTCTTACCAACATTATATACACACTTTGAGACAGAAAAATTCTCTTGCTTGGTAATGGAGTTTTGTCCTGGTGGCGACCTTCATTCGATCAGGCAAAGACAAGCTGGGAAGTATTTCTCGGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCTGAGAATGTGTTGGTGCGAGAAGACGGTCATATAATGCTTTCCGATTTCGATCTCTCTCTAAGGTGCACTGTCAGTCCAACTCTTGTGAAGTCATCAAACCCGATCGCCGAAACGAAAAGCTCAGGATATTGCATTCAGCCAACATGTGCTATGCAGCCAGACTGCATCCAATCTGCATGCTTTTCACCGCGGTTCCTATCCGGAAAAtccaagaaagagaaaatgttcAGATCAAAGAATGACATGCATCACCAAGTGACACCTCTGCCAGAGTTAATCGCCGAGCCAACAAGTGCACGATCTATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGCGAAGGACACGGCAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGTCGAACACCATTCAAAGGTTCAGCAAACCGAGCGACACTGTTTAATGTTGTTGGACAGCCTTTAAGGTTTCCAGAATCTCCTACCGTCAGCTTTGCTGCAAGGGATTTGATCAGAGGTTTACTTGTGAAAGAGCCTCAACACCGTCTTGCCTATAGACGTGGAGCTACCGAAATCAAACAGCATCCGTTCTTTCACAATGTGAACTGGGCACTGATCCGTTGCGCTAATCCGCCAGAAGTACCGAGACAAACCATGATGATGAATCCAACCTCAACTGAAAATGAAGTTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1881 0.4205 MESRSRINAVESISEVQNSVSGVPIRHSLPLTSGNPRPSRPPLYRNNGAASSSTCFLEQRHHHNYGTKKIHHLNSFVINQKHSYQDRNNEGLPTKLCSKQLFGNDSKNCDSSFAVLQSDNCILVPSKRAVVNQPKTYHCQSEISFCPSPQSSFYSATLYSEAKQSFTNTEVSECVSVDNKSYESGEVSTSCDFNDSRKTSICRGSTGSDVSDESNTSSLSSALYKPHKANDIRWEAIQAIRARDGMLEMRHFRLLKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHSIRQRQAGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPIAETKSSGYCIQPTCAMQPDCIQSACFSPRFLSGKSKKEKMFRSKNDMHHQVTPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMNPTSTENEVSGNYLDIDFF 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05655 626 SUPERFAMILY Protein kinase-like (PK-like) 229 607 IPR011009 -
Tsu02g05655 626 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 104 626 - -
Tsu02g05655 626 ProSiteProfiles Protein kinase domain profile. 252 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05655 626 MobiDBLite consensus disorder prediction 24 45 - -
Tsu02g05655 626 Gene3D Transferase(Phosphotransferase) domain 1 479 602 - -
Tsu02g05655 626 Pfam Protein kinase domain 253 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05655 626 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05655 626 PANTHER FLIPPASE KINASE 1-RELATED 104 626 - -
Tsu02g05655 626 CDD STKc_phototropin_like 250 602 - -
Tsu02g05655 626 Gene3D Phosphorylase Kinase; domain 1 250 335 - -
Tsu02g05655 626 Gene3D Transferase(Phosphotransferase) domain 1 336 407 - -
Tsu02g05655 626 SMART serkin_6 252 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05655 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05655 Tsu-Chr2 64788073 64803037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05655 159 626 AGC Kinase Gene Family AT5G47750 69.293 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g05655 Pkinase 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05655 K08286 - gmx:100810909 993.03