Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05643 ATGGCCGAAAACGAGAACGTAACTGCGAACAAACCCAAACCGAGAGTTCGTCCAATCGTAAGGTTAGGGATTTTCCTGATTTCTCACAGTAACTACGTTAGcTTATTGTGTTTCGTAGCAGGAATCGTTGCTCTTCTTGTTCTACCTATATTTGCTAAGAATACTTACGTTTCCGAAAATGCCCTCATGCCAGGTTCTGCTAACAACATGCTCTCTACTCATCACGTTTCCCACGCTAACAAATTCATCAACGACTTAACTGATTCTGACATTGAAAGTCATAAAATTATTGCACAGTATATGTCAGCGTTGGATGCTGAGGTTACTTATCACAAGTTCTACCCTCAACTGAATCAGTTTCATCCTCTTCACTTTTTCACCAGTCCTGATTCGGGTCTAGtctcaaaaaatataagttgttCATCACTTGGAATCAATGTTGCTGGAATTATTAGAGCACCACGGGGTGATGGAAAGGAAGCTATTGTCTTGGTAACGCCTTACAGTCCAAAGAAAGTTGGTCCAGGAGAGGCTTTGTCTTTGGGCATTGCTTACTCGGTGTTCTCACTGCTTTCACGGGTTACATGGCTGGCAAAGGATGTCATATGGCTTGTGGCTGATTCACAATATGGAGAATATTCTGCAGTGGCCGCTTGGCTAAGAGAATATCAGGCCCCTGCATTCCATGAAGCTGACATAGTTAATAGTGAAACATGTAATGACAGTAATGCTATTTATTCTGATGGAAAATTATACAGTGGTTTTAGACGAGCAGGAACTATGGCTGCAGCTCTTGTAATAAAAGTTGCTGAGCAAGGTAACCATCATGAAGACAGTCTTAATATCTACCCTGAGGCGTCAAATGGACAAATGCCAAATCTCGACCTTATCAATATTGTAAATTATCTGGGAGTGCATAAACAAGGTTTGCGGATAAAGATTACGAAGATGTTTTCTCTACTTGGCTCCAGGTGGCTTAATACTTTGGGTGGTATATTTGAATCTCTGGGACAAATTGCTAGGAGCTTAAACCCTGAATGGAAATTTGGTATATCTGCTACTGAGTATGTTGAGGGTGCTGCTACACTGGCAAGTTCGTTGTATTACCAGGGTTTGGGTGTTCCCACTGGTCCTCATGGCGCCTTCCGTGATTATCAAGTTGATGCAATCACTCTGGAAATTTCACCAAAAGTTTCTCCTACTAAAATGATCAGGCGTAATGAATTCATTCTCCTTGGTGGAAGGTTGATTGAAGGAGTCATACGCTCGGTGAACAACCTTCTTGAGAAGTTCCACCAGTCGTTCTTTTTGTACCTCTTGACATCTTCTAGTAAGTTTGTGTCTGTGGGAGATTACATGATTCCATTTGCATTACTCGTTGCACCACTTCCGATACTTGCGGCATCTCTGCATGCTGATGCGAGCAAATCCACTCCTCAATCCACATCTTCTTCTGAAGTTGATGTCAGCCACAAATCTTGGAAATGGCTGAACTCAGCCAGAAAGGTTTTGGTCATTCATTTATGGGGTGCTGTTGTCTCCTTACTCCCATATTTCCTATATCAAATACCTAATTCCACCCCAACAACAAACTTTACAGTGTGGGGTATATTATCAGCTTTTAGCCTCCTAATTTTATACTTCATATCGGGTTCTCCAATTTTCGAAGCTGCTCCATCACAGCCTGATAAAGGCGAATGGGCTAGTTTAAAGTCTGTAACAATATCAACTGCATTCATTGGTTTATCTCTCATGTCAGTCATTAATTTCGCTACAGCAGAAATCGGGGCTTTACTCATTGTCCCAGTTTGTCTGTTGGCTCGACCATTGAAGCTTGATATTCAAGCTAGGAGCTTGAGAGCCTTACTGAGGGCCATTTGTAATCTTGCTTTAGGTTTTATTGCGTTTCCTCCAGTagcatattttttaatgaaaggTGCGTATGAAGGTTTTTATGGTACCAATGTTGGTGACTATTGGAACTGGGTGGAATCCCTTTGGACATGGAACAGTGCTACCTACCTTTATGTAGtcaggttctcgcaccGGGTCATAGGTTCTTACGATCCTAGAGGATTTTTGACCCGAGCTCTAGACGGCGCCGTCGCCGTCGTGAACCTCGCCGGcgACATTGCTTCTCAAGGAGAAGCTGGAGTCATCCCAAGCCCAGACCAACGCCAAGACCAAGCAAGGTCTTCGAATAGCAAGGAACTGTTTGCTGATTTTGCTGATGATCCAAAGAATTGTGGCTCAAGTTTCACAGTATTAGAATCCAACAATTGGGTCTTAGTTCCATCAAAACGAGTCGTTGTTAATCAACCAAAGAATTACCATTGTCAGTCAGAGATTAGGTTTGTCCCAGTCCTCAGAATTGTTTCTATTCAGCCACTCTATATTTGGAAGCGAAACAAAGTTTCACCAATACTGAAGTCAGTGAGTGTGTTAGTGTTGATACTAAGTAGTATGAAAGCAGAGAAGTTTCGAATTCATGTGGTTTTAATGTTAGTAGGAAAACCAACATATATAGTGTGTACCGGAAATGATGTTAGCGACCGAAGCAACAAGAGTAGTTTGAGCAATGCTTTGTATAGACCTCATAAAGCAAATGATATAAGATGGGAAGCAATTCAAGCTATCCGAGCTCGTGATGGCATGTTGGAAATGAGGCATTTTAGGTTGTTAAAGAGATTGGGAAGTAGAGATATAGGAAATTTTTGTCCCGGTGGTGACCTCCATGCTATCATGCAAAGACAACCTGGGAAGTATTTCTCGGAGCATGTTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATAATCTACACAGACCTGAAACCTGAGAATGTATTGGCGAGACAAGACGGTCATATAAGGCTTTCCGATTTCGATCTCTCTCTAAGATATTGCAGTCCAACTCTTGTGAAGTCATCAAACCCGATTGCCGAAAGGAAAACCTCAGGATATTGCATTCAGCCAACATGTGCAATGCAGCCAGACTGCATCCAATCTGCATACTTTTCCCCGCAGTTCCTATCCGGAAAAtccaagaaagagaaaaatttcaGATCAAAGTATGACATGCATCTTCAAGTGACACCTCTCCCGGAGCTAATTGCCGAGCCAACAAGTGCACGGTCATTCTTATACGAACTCTTGTTTGGTTGA 3189 0.4142 MAENENVTANKPKPRVRPIVRLGIFLISHSNYVSLLCFVAGIVALLVLPIFAKNTYVSENALMPGSANNMLSTHHVSHANKFINDLTDSDIESHKIIAQYMSALDAEVTYHKFYPQLNQFHPLHFFTSPDSGLVSKNISCSSLGINVAGIIRAPRGDGKEAIVLVTPYSPKKVGPGEALSLGIAYSVFSLLSRVTWLAKDVIWLVADSQYGEYSAVAAWLREYQAPAFHEADIVNSETCNDSNAIYSDGKLYSGFRRAGTMAAALVIKVAEQGNHHEDSLNIYPEASNGQMPNLDLINIVNYLGVHKQGLRIKITKMFSLLGSRWLNTLGGIFESLGQIARSLNPEWKFGISATEYVEGAATLASSLYYQGLGVPTGPHGAFRDYQVDAITLEISPKVSPTKMIRRNEFILLGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSSSKFVSVGDYMIPFALLVAPLPILAASLHADASKSTPQSTSSSEVDVSHKSWKWLNSARKVLVIHLWGAVVSLLPYFLYQIPNSTPTTNFTVWGILSAFSLLILYFISGSPIFEAAPSQPDKGEWASLKSVTISTAFIGLSLMSVINFATAEIGALLIVPVCLLARPLKLDIQARSLRALLRAICNLALGFIAFPPVAYFLMKGAYEGFYGTNVGDYWNWVESLWTWNSATYLYVVRFSHRVIGSYDPRGFLTRALDGAVAVVNLAGDIASQGEAGVIPSPDQRQDQARSSNSKELFADFADDPKNCGSSFTVLESNNWVLVPSKRVVVNQPKNYHCQSEIRFVPVLRIVSIQPLYIWKRNKVSPILKSVSVLVLILSSMKAEKFRIHVVLMLVGKPTYIVCTGNDVSDRSNKSSLSNALYRPHKANDIRWEAIQAIRARDGMLEMRHFRLLKRLGSRDIGNFCPGGDLHAIMQRQPGKYFSEHVVRFYVAEVLLALEYLHMLGIIYTDLKPENVLARQDGHIRLSDFDLSLRYCSPTLVKSSNPIAERKTSGYCIQPTCAMQPDCIQSAYFSPQFLSGKSKKEKNFRSKYDMHLQVTPLPELIAEPTSARSFLYELLFG 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05643 1062 Pfam Gaa1-like, GPI transamidase component 144 645 IPR007246 GO:0016021|GO:0042765
Tsu02g05643 1062 Gene3D Transferase(Phosphotransferase) domain 1 906 979 - -
Tsu02g05643 1062 SUPERFAMILY Protein kinase-like (PK-like) 883 980 IPR011009 -
Tsu02g05643 1062 SMART serkin_6 830 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05643 1062 PANTHER GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN 8 678 - -
Tsu02g05643 1062 Pfam Protein kinase domain 904 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05643 1062 ProSiteProfiles Protein kinase domain profile. 812 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05643 1062 PANTHER GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN 8 678 IPR007246 GO:0016021|GO:0042765
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05643 Tsu-Chr2 64562435 64573008 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05643 860 904 AGC Kinase Gene Family AT3G27580 55.319 1.41e-07 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g05643 Gaa1 2.1e-119 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05643 K05289 - gmx:100791836 1123.61