Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05624 ATGCCTTCAAGACAAATACCTTCTAcaagttccaattttttcaCCAAACCCAAGTTCATATTCATAGCACTCACCATTTCAGCTTCTGTTGTGATTTTCTTCTCAATCCTTTACTTCCTTTACCATCTTTGGCATTCTCTTGTACACAGAGCCAAGACCATCCCTTTTGATGCAAGTGCTCCTTTGAAGCTCCAAAGATTCTCCTACAAAGACTTAAAGCTAGCCACCAATGGCTTTGACACTTCCAATATCATTGGCAAAGGTGGTTCTGGTACTGTTTTCAAGGGTATACTTAAAGATGGAAAATTTATTGCCATCAAACGGCTGGACTCATTGTCTTTGCAATCAGAGAGAGAGTTTCAAAATGAGTTGCAGATTCTTGGAGGGTTGAGATCACCCTTTTTGGTGACCCTTTTAGGCTAttgtgttgaaaaaaataagagaattttGGTGTATGAGTATATGCCTAACACAAGCTTGCAAGAGTCACTCTTTGGTGATGAGTGTTTTGGTTTGAGTTGGGAAAGAAGGTTTTGCATAATAATGGATGTTGCTAGAGCATTGGAGTTTTTGCACCTTGGATGTGATCCACCTGTGATTCATGGTGATATTAAGCCAAGCAATGTGTTGCTTGATGCCGAGTTTCGAGGGAAGATCTCGGATTTTGGTTTGTCAAGGATTAAGGTGGAGGGTGAATTTGGAGCTGACTTGTTTAGTCAGGATTTGGGGAAGAGTCAAGATCTTTGGAAAAGCCAAGACCTTTCAGGTAATTTGACTGCTGTAGAAACTCCTGTAATAGGCACTCCTGTTGAGAGTGTTAGTGAAGTTGATTTTGCTCTTGCTTTGCAAGCCTCTTCTTCATCCAAAAATAGTAGGACTTGTTTAAATGGTAAAGCTTTGAACTTGAACTCTTTGAATTATAATGCCAATATTGTTGATGAAAGTGAAAGTAGGAGTGTAAATACAAAGGGTAAGGAAATTTCAAGTTTGGATATAGGAGGAGGAGGAAGGGATGattggaataataataataataatatgtttgtTCCTTATGATGATGAGTTTTATAGCACTGATTATAGTAAGGAGTTGGCTGTTAGTAATGCTTGTTTGGTTGATGATGAGAAGGTAAATGGGAAACAATGGGGAAAAGACTGGTGGTGGAAACAAGATGGAAGTGGTGAGTTATGTAGTAAAGACTATGTCATGGAATGGATTGGGAGTCAGATTTGTCCATCAAATGCTGATTGGGATGATGGTATTGATAGTACTAAGAACAAGGAGAAATCAGAGTTGGAAAATTCAAGTCCAATAGGTAAAGTCAGTGATACAATTGCAAATGGACCACAATTACAGGTATCTGTGATGGAAGATGCAGATAATGGAGTTGTTGATATGAAAGAACTGAAGGGAAAGAAAAGCCACAAGATGAAGAATAGGAAGATGCAAGAGTGGTGGAAAGAAGAACATCTTGCTGAATTAAGCAAGAAGAACTCTAACAAGCTGAAAAGTCTTCAAACTAAATGGAAGAAAGGCTTGAAAGTGCCTCATTTTGGTTTGGGTAGAAGGTTCTATCTTTGCCAACGTAATAAGAACTATGGAGAGGACGGACATCATGATTGTGAACAAAACGGTGAGTTTAGCTTCAGAAGAGGTTGGAGGAAAAAAAGCACTCGTTCGATTGGAAGTGACATGTGGAGTGGAGATCTTTACAGCCGCGAACTCAGCAGCACAACTAGTATGAGAGGTACACTGTGTTATGTAGCACCGGAATATGGAGGGTGTGGATTCTTAATGGAGAAAGCTGATATATACAGTTTTGGAGTTTTGATTCTTGTAATTGTATCAGGTAGAAGACCATTACATGTTCTTGCATCACCTATGAAGCTAGAGAAAGCTAACTTAATTAGCTGGTGTAGACACTTGGCTCAAGCTGGTGGCAGTAACATTTTAGAACTAGTTGATgagaaattgaaagaagatgATTACAACAAGGAACAAGCAAACATGTGTATCAACTTGGCACTCACTTGTTTACAGAAAATTCCAGAGTTGAGGCCAGATATTGGAGACATTGTTAAGATTTTGAAGGGGGAGATGGAACTTCCACCACTTCCATTTGAGTTCTCTCCTTCTCCACCTTCTAGATTATACAGCAGATCAAGGAGAAAACAGAAGAGCAATGTAGAATAG 2193 0.3803 MPSRQIPSTSSNFFTKPKFIFIALTISASVVIFFSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKLATNGFDTSNIIGKGGSGTVFKGILKDGKFIAIKRLDSLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRILVYEYMPNTSLQESLFGDECFGLSWERRFCIIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDAEFRGKISDFGLSRIKVEGEFGADLFSQDLGKSQDLWKSQDLSGNLTAVETPVIGTPVESVSEVDFALALQASSSSKNSRTCLNGKALNLNSLNYNANIVDESESRSVNTKGKEISSLDIGGGGRDDWNNNNNNMFVPYDDEFYSTDYSKELAVSNACLVDDEKVNGKQWGKDWWWKQDGSGELCSKDYVMEWIGSQICPSNADWDDGIDSTKNKEKSELENSSPIGKVSDTIANGPQLQVSVMEDADNGVVDMKELKGKKSHKMKNRKMQEWWKEEHLAELSKKNSNKLKSLQTKWKKGLKVPHFGLGRRFYLCQRNKNYGEDGHHDCEQNGEFSFRRGWRKKSTRSIGSDMWSGDLYSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGGSNILELVDEKLKEDDYNKEQANMCINLALTCLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSRLYSRSRRKQKSNVE 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05624 730 PANTHER OS07G0586332 PROTEIN 1 729 IPR044576 -
Tsu02g05624 730 Gene3D Phosphorylase Kinase; domain 1 46 154 - -
Tsu02g05624 730 ProSiteProfiles Protein kinase domain profile. 79 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05624 730 Pfam Protein kinase domain 81 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05624 730 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Tsu02g05624 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tsu02g05624 730 MobiDBLite consensus disorder prediction 420 434 - -
Tsu02g05624 730 PANTHER OS08G0275200 PROTEIN 1 729 - -
Tsu02g05624 730 Gene3D Transferase(Phosphotransferase) domain 1 513 702 - -
Tsu02g05624 730 Gene3D Transferase(Phosphotransferase) domain 1 155 269 - -
Tsu02g05624 730 SMART serkin_6 79 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05624 730 SUPERFAMILY Protein kinase-like (PK-like) 59 716 IPR011009 -
Tsu02g05624 730 MobiDBLite consensus disorder prediction 707 730 - -
Tsu02g05624 730 MobiDBLite consensus disorder prediction 416 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05624 Tsu-Chr2 64379764 64382179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05624 561 696 Receptor kinase-like Gene Family AT3G58690 32.117 4.55e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Tsu02g05624 Pkinase 9.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05624 - - ccaj:109812677 1118.61