Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05606 ATGGTGGAGCCTGCAGTCAATGGAGCAAAGAATGTGATCATAGCGGCTGCCGAAGCAAATGTGCGGCGTGTGGTTTTCACTTCATCAATTGGAGCCGTCTATATGGACCCTAAGAGGGGTGTTGATGTTGAAGTTGACGAGTCTTGTTGGAGTGATTTGGAGTTTTGCAAGAACACCAAGAATTGGTATTGTTATGGGAAAGCAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAGAAAGGTGTTGATTTGGTTGTAGTGAATCCAGTTTTGGTTCTTGGACCATTGTTACAACCTACAATCAATGCAAGCACAATTCACATACTAAAGTACTTAACTGGATCAGCTAAGACTTATGCAAATGCAACACAAGCTTATGTTCATGTTAGGGATGTGGCATTAGCTCACATACTTGTTTATGAAAAACCTTCTGCTTCTGGTAGATACTTATGTGCCGAAAGTTCATTGCACCGTGGGGAGCTTGTTGAAATTCTTGCCAAGTACTTCCCAGAGTACCCTATTCCTACCAGGTGTTCAGATGAAAAAAATCCTCGAGTGAAACCACATATCTTCTCAAATAAAAAACTGAGAGATTTGGGATTGGAATTCACTCCAGTGAGTCAATGTTTATATGAAACTGTTAAGAGCCTGCAAGAGCAAGGTCATCTTTCTGTTCCAAAGAAAGAAGATTAA 696 0.4138 MVEPAVNGAKNVIIAAAEANVRRVVFTSSIGAVYMDPKRGVDVEVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTRCSDEKNPRVKPHIFSNKKLRDLGLEFTPVSQCLYETVKSLQEQGHLSVPKKED 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05606 231 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 1 226 - -
Tsu02g05606 231 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 219 IPR036291 -
Tsu02g05606 231 Pfam NAD dependent epimerase/dehydratase family 6 146 IPR001509 -
Tsu02g05606 231 Gene3D - 1 231 - -
Tsu02g05606 231 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05606 Tsu-Chr2 64203017 64206544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05606 1 225 Monolignol Biosynthesis Gene Families AT1G15950 80.000 4.16e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05606 K09753 - gmx:100789070 418.313