Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05585 aTGGTGAAGCTGGTTCTGAAAGCTGGTAGCAGACCTCCATGGGTGGGACTAGCAGCTGCAGTTTGGATCCAAATAGCTGCTGGAAATTCCTATAACTTTCCTCTATACTCCTCTGCTCTCAAATCTGTGTTGGGTCTCAATCAACAACAAGTGACTATTCTTGGAGTGGCCAATGATGTTGGGGAGAATTTTGGTTTGCTACCTGGTATTTCCTGCAACAAGTTCCCTCCTTGGGCTTTGGTTCTTGTTGGTTCTGTCCTTTGTTTCTTTGGTTATGGTGTTATTTGGCTTGCTGTTAGCCAAACTGTTTCCAATTTGCCCTATGTTCTGCTATGTCTCGCACTTTGTGTTGCCACGAACAGCGGTGCATGGTTTGGCACGGCCGTGCTTGTTACCAACATGAGAAACTTTCCTCTCAGTAGAGGCACAATCTCTGGCATTCTCAAAGGTTATATAGGAATCAGTGCTTCGGTATATACATTAATATATAGCATATTGCTGAAAGGTTCCGCTTCGAATTTACTCTTGTTTCTAGCATTTGGAGTTTCTACTGTGTGCTTAATTTTGATGTACTTCATTAGGCCTTGTACTCCTCCTTCTGGTGAAGACTCTTCAGTGCATGtccattttattttcacacAAGCTTCGAGTATTTTACTTGCCACATATCTTGTTACGACAACGATACTAAGTGACATGGTTTCGATTAATGATGTTGTTTCCTACATCTTAGTTGCAATAATGATTATACTTATGATAACTCCCCTTGCAATTCCTTTGAAAATGACTCTATTTCCTGCAAGTCAAAAAAACAATGTTTCATTAGTTGGTTCTTCTGATCAGCTAGCATCAGGTGGTGATGTTTCAACTTCAACACAAACAAATCCATTGCTTGGAAGTTTTCATGAAAATGAGGATGCTTCTTCAGATATTGAGATCCTAATTGCAGAAGGGGAGGGTGCAATTAGGAAGAAAAGGAGACCAAAAAGGGGAGATGATTTTAAGTTCAAAGAAGCTTTAGTTAAGGCTGATTTTTGGCTACTTTGGTTTTCTTATTCATTAGGAGTTGGCTCAGGTGTAACTGTTCTCAATAATTTGGCTCAAATTGGTGTTGCTTTGGGTGTTGAAGATGCAACCATATTGCTTTCAGTCTTCAGCTTTTGCAATTTTATCGGTCGTCTAGGTGCTGGTGCTGTCTCTGAACACTTTGTTAGGTTGAAAACACTACCTAGAACAATTTGGATGACAAGTACACAAGTTATTATGATCATAGCATTTTTGCTTTATGCTTCAGCTCTAGATGGCACTCTTTATGCTGCAACAGCTTTGCTTGGAATGTGCTACGGCGTTCAGTATTCTATAATGGTTCCAACTGTTTCTGAACTATTCGGTTTGAAGCACTTTGGCGTAATTAGTAGCTTCATGATGCTAGGAAATCCAATTGGTGCacttcttttttctgttttcctAGCTGGTAATTTGTATGATACAGAAGCTGCAAAACAAGGAAACTCCACATGCTATGGTGCAAATTGTTTCAGGATCACTTTTCTGGTTTTGGCTGGTGTATGTGGAATTGgTTATGGTTCTGTTCTATGTTCTGGTAACTATGCATGTGCACATGATTCACCAGCTCTTGTATCTGCTTTTAGCACCCTCATTTGA 1665 0.3928 MVKLVLKAGSRPPWVGLAAAVWIQIAAGNSYNFPLYSSALKSVLGLNQQQVTILGVANDVGENFGLLPGISCNKFPPWALVLVGSVLCFFGYGVIWLAVSQTVSNLPYVLLCLALCVATNSGAWFGTAVLVTNMRNFPLSRGTISGILKGYIGISASVYTLIYSILLKGSASNLLLFLAFGVSTVCLILMYFIRPCTPPSGEDSSVHVHFIFTQASSILLATYLVTTTILSDMVSINDVVSYILVAIMIILMITPLAIPLKMTLFPASQKNNVSLVGSSDQLASGGDVSTSTQTNPLLGSFHENEDASSDIEILIAEGEGAIRKKRRPKRGDDFKFKEALVKADFWLLWFSYSLGVGSGVTVLNNLAQIGVALGVEDATILLSVFSFCNFIGRLGAGAVSEHFVRLKTLPRTIWMTSTQVIMIIAFLLYASALDGTLYAATALLGMCYGVQYSIMVPTVSELFGLKHFGVISSFMMLGNPIGALLFSVFLAGNLYDTEAAKQGNSTCYGANCFRITFLVLAGVCGIGYGSVLCSGNYACAHDSPALVSAFSTLI 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05585 554 CDD MFS_Mch1p_like 12 527 - -
Tsu02g05585 554 SUPERFAMILY MFS general substrate transporter 242 532 IPR036259 -
Tsu02g05585 554 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 527 - -
Tsu02g05585 554 Pfam Nodulin-like 13 260 IPR010658 -
Tsu02g05585 554 SUPERFAMILY MFS general substrate transporter 11 198 IPR036259 -
Tsu02g05585 554 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 527 - -
Tsu02g05585 554 Gene3D MFS general substrate transporter like domains 343 544 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05585 Tsu-Chr2 64054836 64058235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05585 1 527 Nodulin-like Gene Family AT1G80530 58.955 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05585 - - adu:107459780 785.793