Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05584 ATGTCCAACTATATTACTGACTTCCAAACATTAAAAGCGTTTAATATCGTAAGTCATCCGGGTCCTACTCCGAAGATACAAGAGGTTATTTGGTCTTTTCCTCCGACTAGTTGGATAAAAGCTAACACGGACGGTGCAGCGAGGGGTTCTCCCGGTCATGCCTCAGCTGGAGGCATTTTTCGTGACTCAAGTGGAGGAATGAAAGGTTGTTTGAGCTTTTATTTGGGTATCCGGTCTTCTCTCTTTGCTGAGagaAATTCTCACAAGGCAATTATGGGTAAGGTTCACGGTTCACTTGCTCGTGCCGGAAAAGTGAGAGGTCAAACACCTAAAGTGGCCAAGCAAgacaagaagaagaagccacGTGGTCGTGCTCACAAGCGTATGCAGTACAATCGCAGATTCGTCACTGCCGTTGTGGGATTCGGCAAGAAGAGAGGACCAAACTCATCTGAGAAGTAA 462 0.4416 MSNYITDFQTLKAFNIVSHPGPTPKIQEVIWSFPPTSWIKANTDGAARGSPGHASAGGIFRDSSGGMKGCLSFYLGIRSSLFAERNSHKAIMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05584 153 PANTHER 40S RIBOSOMAL PROTEIN S30 92 153 - -
Tsu02g05584 153 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 92 153 - -
Tsu02g05584 153 MobiDBLite consensus disorder prediction 113 130 - -
Tsu02g05584 153 MobiDBLite consensus disorder prediction 99 130 - -
Tsu02g05584 153 Pfam Ribosomal protein S30 94 150 IPR006846 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05584 Tsu-Chr2 64051692 64054138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05584 92 153 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 3.45e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05584 K02983 - zju:107424007 119.783