Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05581 ATGTCTCGTAAGAATGATTCTAATTATACTTCAATACCTATTAGCTCAACATATCTAGAATTACAACCTCAACATCATAAATCAAATTCTTTTCAAAGATTGTCTTTTGATGAGTCTGGTGGTTTTTTAGGATCTAAGGTTGTTGTTAATCATAATGATgacaatgataatgatgatgatgatgatttagaAATTGATATTGATAATTATCCTCTTGTTGTTGGGCCTAATCCAAATCATGGTTCTGGTGTACCTGGTGCTGTGTTCAATTTGACTACTACTATTATTGGGGCAGGACTTATGGCTCTTCCTGCTACAATGAAAGTTCTTGGTGTCGTTGTTGGGATTGTGTTGATTATTTTGATGGGAATTTTGTCTGAAATTAGTGTCGAATTGTTGGTTCGTTTTTCTGTTTTGTGTAAAGCATCCTCTTATGGTGAGGTTGTTCAAGAAGCTATGGGAAGGCCTGCTAGGATTTTGTCtgaaatttgtattattttgaaTAATGGAGGTGTTTTGGtggtttatttgattataatgGGAGATGTTTTGTCGGGTTCGGTTCATCATTTGGGGGTTTTCGATCAGTTAATGGGGAATGGGGCTTGGGATCAGAGGAAGCTTGTGATTCTTGTTATTATGGTGATTTTTCTTGCACCTCTTTGTTCACTTGATAAAATTGATTCCTTGAGTTTGACTTCAGCTGCGTCGGTCGCTCTTGCCGTCATGTTTGTCATCGTTACATTCACTGTTGCTTCTATTAAGCTTGTTGAAGGAAAGATTGATCCTCCTAGGATGGTTCCTGATTTTAGCTCGAAAAAGGATATCTTGGATTTACTTGTGGTGATTCCAATCATGACAAATGCATATGTTTGTCATTTTAATGTGCAGCCGATATACAATGAGCTTGAAGGTAGGTCACCGCAGAAGATGAACCGAGTAGGAAGGCTCACGACAATTTTGTGCATTCTGGTTTATGCTGCAACATCACTTTCCGGTTACCTATTATTTGGGGACGATACTGAGTCAGATGTCCTGACTAATTTTGATAAAGATCTTGGAATTCGGTTTAGTTCGGTCTTGAACTATATCGTCAGAGTTGGCTACGTTCTCCATTTGATTACTGTCTTCCCCGTTATTCATTTCTCGCTACGCCAAACGGTGGATACCTTGGTGTTTGAGGGATCGCCTCCTTTATCTGAAAGTAGGAAGAGATCATTAGGGCTGACTGCGATTCTGTTGGTCCTCATATATATTGGTTGTACCATGATTCCAAACATTTGGACAGCTTTTAAGTTCACTGGCGCAACGACGGCGGTATCGTTAGGTTTCATATTCCCACCTCTTGTTGCAATTAGATTAGGCCATAAATGGGATTTGAGCTGTGTAGAATGGTTTTTATCATGGTTAATGTTGATATTGGCTGTAACTGTTAGCATTGTAGGAGTCATCGGCAATGTCTATAGCCTCGAGAGTAAGTCTTAG 1485 0.3778 MSRKNDSNYTSIPISSTYLELQPQHHKSNSFQRLSFDESGGFLGSKVVVNHNDDNDNDDDDDLEIDIDNYPLVVGPNPNHGSGVPGAVFNLTTTIIGAGLMALPATMKVLGVVVGIVLIILMGILSEISVELLVRFSVLCKASSYGEVVQEAMGRPARILSEICIILNNGGVLVVYLIIMGDVLSGSVHHLGVFDQLMGNGAWDQRKLVILVIMVIFLAPLCSLDKIDSLSLTSAASVALAVMFVIVTFTVASIKLVEGKIDPPRMVPDFSSKKDILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRLTTILCILVYAATSLSGYLLFGDDTESDVLTNFDKDLGIRFSSVLNYIVRVGYVLHLITVFPVIHFSLRQTVDTLVFEGSPPLSESRKRSLGLTAILLVLIYIGCTMIPNIWTAFKFTGATTAVSLGFIFPPLVAIRLGHKWDLSCVEWFLSWLMLILAVTVSIVGVIGNVYSLESKS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05581 494 PANTHER BNAC06G40470D PROTEIN 57 493 - -
Tsu02g05581 494 PANTHER AMINO ACID TRANSPORTER 57 493 - -
Tsu02g05581 494 Pfam Transmembrane amino acid transporter protein 81 485 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05581 Tsu-Chr2 64028302 64030537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05581 6 494 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.255 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05581 - - gmx:100791860 771.926