Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05567 ATGGCTTTTTGCCCACTTTTTTGTTGTGGAATTGCTTCGGATCGCAAAGGACGTGGGAAGAAACAACCTCCATGGCGGGTGTTTTCTTTGAAGGAATTACACTCAGCTACAAATAATTTCAACTATGATAACAAGCTTGGCGAAGGGGGTTTCGGAAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTGAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGTCTAATTGTTTATGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCAACAGAAAGCCTCCTTGATTGGAATCGACGGATGAATATTGCAATCGGGTCTGCTGAGGGAATTTTATATCTTCATGTCCAAGCAACACCGCATATCATCCATAGGGACGTTAAAGCAAGTAATGTGTTACTGGATTCAGATTTCGAAGCACGTGTTGCTGATTTTGGTTTTGCCAAGTTGATCCCCGATGGGGCGACACATGTGACTACAAGAGTTAAAGGCACCCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTCGGAATTCTCCTTCTAGAACTTGCTAGCGGCAAAAAACCACTCGAAAAACTAAGCTCATCAGTGAAACGCTCAATTAATGATTGGGCTCTACCATTAGCTTGtgagaaaaaatttaaagaacttGCTGATCCAAGACTTAATGGTGACTATTCTGAAGAAGAGCTTAAAAGGGTTGTATTAGTTGCTCTAATATGTGCTCAGAGTCAGCCGGAAAAGAGACCAACGATGCTCGAGGTGGTAGAGCTACTGAAGGGAGAATCAAAAGAGAAGGTTTCTCAGTTGGAGAATAATGAACTCTTTAAGAACCCTCTTGCTGTTGGAAATAACAATGATGAGATATCAGCTGCTGAAGGGAGTTCTGACTTCATCTCAGAAGAGAAGGAATCAAAACATGAGACTACAGAATCTTGA 1095 0.4174 MAFCPLFCCGIASDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGILYLHVQATPHIIHRDVKASNVLLDSDFEARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRSINDWALPLACEKKFKELADPRLNGDYSEEELKRVVLVALICAQSQPEKRPTMLEVVELLKGESKEKVSQLENNELFKNPLAVGNNNDEISAAEGSSDFISEEKESKHETTES 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05567 364 PANTHER - 1 332 - -
Tsu02g05567 364 MobiDBLite consensus disorder prediction 330 364 - -
Tsu02g05567 364 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Tsu02g05567 364 PANTHER OS01G0253100 PROTEIN 1 332 IPR045271 GO:0004714|GO:0006468
Tsu02g05567 364 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05567 364 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05567 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Tsu02g05567 364 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Tsu02g05567 364 Coils Coil 305 325 - -
Tsu02g05567 364 MobiDBLite consensus disorder prediction 349 364 - -
Tsu02g05567 364 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05567 364 MobiDBLite consensus disorder prediction 330 345 - -
Tsu02g05567 364 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Tsu02g05567 364 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Tsu02g05567 364 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05567 Tsu-Chr2 63935091 63938739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05567 28 314 Trihelix Transcription Factor Family AT1G70460 50.515 2.41e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Tsu02g05567 Pkinase 3.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05567 - - gmx:100788153 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05567 02 63935091 63938739 Tsu02g05567 02 63935091 63938739 ECH