LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g05517	ATGAAGAGCGTAAAAGTACCTTTCAATGGTATTGTAACCGATTTTAGGGGAAGAGCAGTGCACTATAAAGATGATTGGATTTCTGGTCTCACTTCAGGAATAGGGATATTGGCACCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCTTTCGGCGCGCAACTCAGTAGGGACACAGATGGAAGCTTGAGCACTGTAGAAACATTGGCTTCTACTGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAACCTCTGCTAGTACTTGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTACAATTATGCCAAAAATAAGGAAGGATTAGGGAAAGAACTCTTCTTGGCCTGGGTAGGATGGGTTTGTGTATGGACTGCTCTATTGCTATTTCTTTTAGCAATACTCAATGCTGCCGTTATCATAAATAGATTTACACGGATTGCTGGTGAACTTTTTGGCATGTTGATCACAGTCTTATTCATTCAAGAGGCAATCAAGGGAATGGTAACTGAGTTTCAAATTCCTAAAGAGAGTGATCCAACATTGGATAAGTTCCAATTTCATTGGCTCTATGCAAATGGATTGCTTGGTATTTTATTCACCTTTGGCCTTCTTTATACTTCTCTAAAAAGCAGAAGAGCAAGATCATGGTTATATGGAACAGAATGGTTAAGAAGTTTTATAGCAGATTATGGAGTACCATTCATGGTAGTTGTGTGGACAATTTTATCATTCACGGTAGTAACAAGTAAAGTTCCTTCGGGAGTTCCTAGAAGACTCATTGCACCTTTGGCTTGGGAATCTACATCATTACATCATTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCAACACACATTTTTGAGGCTTTTATTCCTGCCATAATGATAGCAGGACTTTACTTCTTTGACCATAGTGTTGCATCCCAATTGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCCTCCCTCCTTCAAATGGCGTTTTGCCTCAATCCCCTATGCACACCAAGAGTCTAGCTGTTCTCAAGAAACAGTTGATCCGACGAAAGATGGTTAAAAGTGCAAAGGAAAGCATAAGACTGAAAGCTAGCAATTCTGAAATATATGGAAAGATGCAAGAAGTGTTTATAGAAATGGATAATAATCCTAATAATCATTCAGTGGTAAAAGAACTAGAGGATTTGAAAGATATTGTCCTAAATGGTGAAGATAAAGGAGACAACAATACGAACACATTTGATCCTGAGAAACATATTGATACATATTTGCCTGTAAGAGTAAAGGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTAGGAGGAGCAGTGTTTGCTATGCCTGCCATAAAAATGATACCAACTTCAGTCTTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATATTGCTTCTCTTTGTAAGACCTAGTAGGTGGTACAAGTTATTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCCTTCAGATACATAGTCTTGTTTACACTCTTCCAATGTGTGTATTTCTTGATTTGTTTTGGAGTGACATGGATTCCCATTGCTGGCATGTTGTTCCCTTTGCCTTTCTTTTTGTTGATCACATTAAGACAACATATACTTCCCAAGATATTCAATCCAAACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATACCAGGTGCTCCAAGACTTAGTTTCAATCTATCCTTCCAGGAGGTTGAATCACCAGAAAGTGTATCAAAGGAAATAGGTAATGCTGAAATGTTAGATGAGTTAACCACTAATAGAGGAGAGTTGAAGGTTAGAACTATTAGCTCTACGGAGGAAAGAAATTATCAGGTTTATCCTGATGAAATTGATTCACACTCGGAAAGAGATACTCTGCAGTGA	2022	0.3853	MKSVKVPFNGIVTDFRGRAVHYKDDWISGLTSGIGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNKEGLGKELFLAWVGWVCVWTALLLFLLAILNAAVIINRFTRIAGELFGMLITVLFIQEAIKGMVTEFQIPKESDPTLDKFQFHWLYANGLLGILFTFGLLYTSLKSRRARSWLYGTEWLRSFIADYGVPFMVVVWTILSFTVVTSKVPSGVPRRLIAPLAWESTSLHHWTVIKDMGKVSPTHIFEAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRLKASNSEIYGKMQEVFIEMDNNPNNHSVVKELEDLKDIVLNGEDKGDNNTNTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGGAVFAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVRPSRWYKLLEGDHASFVESVPFRYIVLFTLFQCVYFLICFGVTWIPIAGMLFPLPFFLLITLRQHILPKIFNPNHLRELDAAEYEEIPGAPRLSFNLSFQEVESPESVSKEIGNAEMLDELTTNRGELKVRTISSTEERNYQVYPDEIDSHSERDTLQ	673

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g05517	673	Pfam	HCO3- transporter family	7	180	IPR011531	GO:0006820\|GO:0016021
	Tsu02g05517	673	Pfam	HCO3- transporter family	201	375	IPR011531	GO:0006820\|GO:0016021
	Tsu02g05517	673	Pfam	HCO3- transporter family	455	545	IPR011531	GO:0006820\|GO:0016021
	Tsu02g05517	673	Gene3D	Helical hairpin bin	18	60	-	-
	Tsu02g05517	673	PANTHER	ANION EXCHANGE PROTEIN	1	663	IPR003020	GO:0005452\|GO:0006820\|GO:0016020
	Tsu02g05517	673	PANTHER	BORON TRANSPORTER 4-RELATED	1	663	-	-

Showing 1 to 6 of 6 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu02g05517	Tsu-Chr2	63499008	63503388	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu02g05517	5	670	Antiporters	AT1G74810	69.300	0.0	973

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g05517	K24194		-	gmx:100811184	1128.24

Showing 1 to 1 of 1 entries