Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05517 ATGAAGAGCGTAAAAGTACCTTTCAATGGTATTGTAACCGATTTTAGGGGAAGAGCAGTGCACTATAAAGATGATTGGATTTCTGGTCTCACTTCAGGAATAGGGATATTGGCACCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCTTTCGGCGCGCAACTCAGTAGGGACACAGATGGAAGCTTGAGCACTGTAGAAACATTGGCTTCTACTGCCATTTGTGGAATCATACACTCCATTTTTGGTGGACAACCTCTGCTAGTACTTGGAGTGGCAGAACCTACTATCCTTATGTACACCTATTTGTACAATTATGCCAAAAATAAGGAAGGATTAGGGAAAGAACTCTTCTTGGCCTGGGTAGGATGGGTTTGTGTATGGACTGCTCTATTGCTATTTCTTTTAGCAATACTCAATGCTGCCGTTATCATAAATAGATTTACACGGATTGCTGGTGAACTTTTTGGCATGTTGATCACAGTCTTATTCATTCAAGAGGCAATCAAGGGAATGGTAACTGAGTTTCAAATTCCTAAAGAGAGTGATCCAACATTGGATAAGTTCCAATTTCATTGGCTCTATGCAAATGGATTGCTTGGTATTTTATTCACCTTTGGCCTTCTTTATACTTCTCTAAAAAGCAGAAGAGCAAGATCATGGTTATATGGAACAGAATGGTTAAGAAGTTTTATAGCAGATTATGGAGTACCATTCATGGTAGTTGTGTGGACAATTTTATCATTCACGGTAGTAACAAGTAAAGTTCCTTCGGGAGTTCCTAGAAGACTCATTGCACCTTTGGCTTGGGAATCTACATCATTACATCATTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCAACACACATTTTTGAGGCTTTTATTCCTGCCATAATGATAGCAGGACTTTACTTCTTTGACCATAGTGTTGCATCCCAATTGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCCTCCCTCCTTCAAATGGCGTTTTGCCTCAATCCCCTATGCACACCAAGAGTCTAGCTGTTCTCAAGAAACAGTTGATCCGACGAAAGATGGTTAAAAGTGCAAAGGAAAGCATAAGACTGAAAGCTAGCAATTCTGAAATATATGGAAAGATGCAAGAAGTGTTTATAGAAATGGATAATAATCCTAATAATCATTCAGTGGTAAAAGAACTAGAGGATTTGAAAGATATTGTCCTAAATGGTGAAGATAAAGGAGACAACAATACGAACACATTTGATCCTGAGAAACATATTGATACATATTTGCCTGTAAGAGTAAAGGAGCAAAGAGTGAGCAACCTTTTACAATCACTCTTTGTAGGAGGAGCAGTGTTTGCTATGCCTGCCATAAAAATGATACCAACTTCAGTCTTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATATTGCTTCTCTTTGTAAGACCTAGTAGGTGGTACAAGTTATTGGAAGGTGATCATGCTTCCTTTGTTGAGTCAGTACCCTTCAGATACATAGTCTTGTTTACACTCTTCCAATGTGTGTATTTCTTGATTTGTTTTGGAGTGACATGGATTCCCATTGCTGGCATGTTGTTCCCTTTGCCTTTCTTTTTGTTGATCACATTAAGACAACATATACTTCCCAAGATATTCAATCCAAACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATACCAGGTGCTCCAAGACTTAGTTTCAATCTATCCTTCCAGGAGGTTGAATCACCAGAAAGTGTATCAAAGGAAATAGGTAATGCTGAAATGTTAGATGAGTTAACCACTAATAGAGGAGAGTTGAAGGTTAGAACTATTAGCTCTACGGAGGAAAGAAATTATCAGGTTTATCCTGATGAAATTGATTCACACTCGGAAAGAGATACTCTGCAGTGA 2022 0.3853 MKSVKVPFNGIVTDFRGRAVHYKDDWISGLTSGIGILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLVLGVAEPTILMYTYLYNYAKNKEGLGKELFLAWVGWVCVWTALLLFLLAILNAAVIINRFTRIAGELFGMLITVLFIQEAIKGMVTEFQIPKESDPTLDKFQFHWLYANGLLGILFTFGLLYTSLKSRRARSWLYGTEWLRSFIADYGVPFMVVVWTILSFTVVTSKVPSGVPRRLIAPLAWESTSLHHWTVIKDMGKVSPTHIFEAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIRLKASNSEIYGKMQEVFIEMDNNPNNHSVVKELEDLKDIVLNGEDKGDNNTNTFDPEKHIDTYLPVRVKEQRVSNLLQSLFVGGAVFAMPAIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVRPSRWYKLLEGDHASFVESVPFRYIVLFTLFQCVYFLICFGVTWIPIAGMLFPLPFFLLITLRQHILPKIFNPNHLRELDAAEYEEIPGAPRLSFNLSFQEVESPESVSKEIGNAEMLDELTTNRGELKVRTISSTEERNYQVYPDEIDSHSERDTLQ 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05517 673 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Tsu02g05517 673 Pfam HCO3- transporter family 201 375 IPR011531 GO:0006820|GO:0016021
Tsu02g05517 673 Pfam HCO3- transporter family 455 545 IPR011531 GO:0006820|GO:0016021
Tsu02g05517 673 Gene3D Helical hairpin bin 18 60 - -
Tsu02g05517 673 PANTHER ANION EXCHANGE PROTEIN 1 663 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tsu02g05517 673 PANTHER BORON TRANSPORTER 4-RELATED 1 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05517 Tsu-Chr2 63499008 63503388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05517 5 670 Antiporters AT1G74810 69.300 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05517 K24194 - gmx:100811184 1128.24