Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05491 ATGACTAAAGTTAAGAGACCAAAAATCCTCCGCCGGAACGACAAGAGCTACGACACGGCGGCTAACAATAGAAAGATGTCTAATGAAGAGAAGACTCCGATCGGTTCGAATGAAGAAAATAGGATTGTTCCGGATCAAGAAGATAATGCTAATATAGTTGCTGATCCTCTATTATGTGACGAATCTGCTGCCGATGTTTTTGACGATTCTGAGCTCAGTGGTATGGATTATGTAATATCTGATCAAACTGTCAGTTTCAATGAAGATAATATGGTTACTCCGGTTCAACTTAAAGCTGATATAGTTGTTGATCGTCAATTATGGTATGCTACTGGTTTATTTGACGAATATCGTAGTGTTGAGATGTTTGATCAAACTGTCATTTTGAATGAAGATATCATGGTTTCTCCGATTCAAGAGAAAGTTGTTGATGACGATAGTCTACTATGGCGCGAATCTGCTGCCGTAATATTTGATAACTGTCATAATGCTGAGGAGAAATCACGGCCTGTTCAAAAACCCCCAGAAAAGGCAGCTTTAACTCCAAAGAATCGTGTGATCCTTATTGACTGGCTTGTAAAGgCGTGTGTTGAATTAAAACTCCAAACAGATACACTTTACAGCAGTGTACATCTCGTAGACTGGTTTTTTTCTACAAGTTACATTGAAGTAGGAAGATACCCGCTTCTTGGCATCTCATGTTTGCTTATTGCATCGAAGTACGAAGAACTTGAAAAATCGCGGCCGCGTATTGAATATTTCTGCTCCGATACAGAAGATGCATGCGAAAAAGAGCAGATAATATACATGGAGAATCTAGTTTTCGAATATGTAGGGGATCATTTGGTTGATCCTACCACAAATACATTCTTGAGGATGTTTCTTGTAGTAGCAAGAGCTTCCACCAAGTTGCAGTGTATGTCCTCTTTTCTTGCAGAATTATCACTCCCTCCTTGGGATGAATCTCTCCAGCAATTCACTACTTACAAGTCATGTGAATTGAAAAGTATTGTTTTCGATCTTCAAGCTCTTCAGCGGAAAATTGAGGACAATGTTTGTACCACAATCCACAAGAAGTATTCAGAACCCAAGtTCCAAAATGTTGCTGCATTATATTCAGTTGACTTGGTTGATACAGTGTTCTGA 1146 0.3901 MTKVKRPKILRRNDKSYDTAANNRKMSNEEKTPIGSNEENRIVPDQEDNANIVADPLLCDESAADVFDDSELSGMDYVISDQTVSFNEDNMVTPVQLKADIVVDRQLWYATGLFDEYRSVEMFDQTVILNEDIMVSPIQEKVVDDDSLLWRESAAVIFDNCHNAEEKSRPVQKPPEKAALTPKNRVILIDWLVKACVELKLQTDTLYSSVHLVDWFFSTSYIEVGRYPLLGISCLLIASKYEELEKSRPRIEYFCSDTEDACEKEQIIYMENLVFEYVGDHLVDPTTNTFLRMFLVVARASTKLQCMSSFLAELSLPPWDESLQQFTTYKSCELKSIVFDLQALQRKIEDNVCTTIHKKYSEPKFQNVAALYSVDLVDTVF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05491 381 SMART cyclin_7 190 276 IPR013763 -
Tsu02g05491 381 Gene3D - 170 283 - -
Tsu02g05491 381 PANTHER CYCLIN-A2-4 308 381 - -
Tsu02g05491 381 PANTHER CYCLIN-A2-4 146 316 - -
Tsu02g05491 381 SUPERFAMILY Cyclin-like 147 277 IPR036915 -
Tsu02g05491 381 SUPERFAMILY Cyclin-like 285 374 IPR036915 -
Tsu02g05491 381 PANTHER CYCLINS 308 381 IPR039361 -
Tsu02g05491 381 Gene3D - 157 316 - -
Tsu02g05491 381 Gene3D - 317 378 - -
Tsu02g05491 381 Pfam Cyclin, N-terminal domain 157 277 IPR006671 -
Tsu02g05491 381 MobiDBLite consensus disorder prediction 1 41 - -
Tsu02g05491 381 PANTHER CYCLINS 146 316 IPR039361 -
Tsu02g05491 381 Pfam Cyclin, C-terminal domain 317 371 IPR004367 -
Tsu02g05491 381 SMART Cyclin_C_2 285 374 IPR004367 -
Tsu02g05491 381 CDD CYCLIN 184 274 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05491 Tsu-Chr2 63221124 63227211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05491 144 381 Core Cell Cycle Gene Families AT1G15570 36.496 1.93e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05491 K06627 - fve:101299692 169.474