Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05483 atgccTAAGAAGCTTCAAAAAACCCTTCAAGATTAcctcaacaaaatcaaaaacaaaaaacctcaTCCTCAAATTACACTAACCAAAATGCTCTCCGGTTGCAAACATCCCAAAACGCCATCGTTTTCTTTAGAAAACGGTAGAAACACATCATCTAACGCCGTTGACAACAAAATCAACGATGCAGCAACACTAGCTGATGTTGACCGTTTTCTTTTCGAGAATTTCAAGTCTCTTTATTTCAAAGATGACGAAGAAACcgaaaacaataacaataacaacaacaacagtaacCGTAACAAAAGAATCTCGGATGGAAGAAACAACGAGGAACCACTGAAACTTGGTTCCTGGTTGTTTGAATCACCGAGATTCATTACAACACCACCACAAGATCTTTGTGGATCAACACGGTTTTTCGTGAAACCGGGAAATTCAGGATCATTGATGGAAGATGTTCTATCTTTATCAAACAGTGATGAAGCTGATTCGAGTAATTCGAATTCATCATCAACTGCATCACCAACAAAAGAGGTTATTATGGTTAATCATCATCATGATCATGATCATAATAATGCTCTTCCTGATAACTGTGTTGCTTTGTTATCGTATTCGCCTAGTCCTTACGATGATTTTAGGCGATCCATGCAAGAATTGGTCGAATCAAAGTATGGTAAGATTGAAAACAATCATAGAAAAATTGATTGGGATTTCATGGAggagattttgttttgttacctTAATGTTAATGAGAAAAAGTCTCATAAGTTTATTTTAAGTGCTTTTGTGGATCTCATCACTGTTATGCGTCGGAATTCAGAGGCAGCTCCGGGGAAACCGTGTAGCGTTCGAACTGTTAGGATTGGTAGGGAAGTCAGGAAGAAGAAGACCAAGCAAGTTACCATAGAATTTGAGTCTTCttaa 924 0.3442 MPKKLQKTLQDYLNKIKNKKPHPQITLTKMLSGCKHPKTPSFSLENGRNTSSNAVDNKINDAATLADVDRFLFENFKSLYFKDDEETENNNNNNNNSNRNKRISDGRNNEEPLKLGSWLFESPRFITTPPQDLCGSTRFFVKPGNSGSLMEDVLSLSNSDEADSSNSNSSSTASPTKEVIMVNHHHDHDHNNALPDNCVALLSYSPSPYDDFRRSMQELVESKYGKIENNHRKIDWDFMEEILFCYLNVNEKKSHKFILSAFVDLITVMRRNSEAAPGKPCSVRTVRIGREVRKKKTKQVTIEFESS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05483 307 MobiDBLite consensus disorder prediction 84 108 - -
Tsu02g05483 307 Pfam Transcriptional repressor, ovate 205 267 IPR006458 -
Tsu02g05483 307 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 282 IPR038933 GO:0045892
Tsu02g05483 307 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 282 - -
Tsu02g05483 307 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 199 268 IPR006458 -
Tsu02g05483 307 ProSiteProfiles OVATE domain profile. 201 268 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05483 Tsu-Chr2 63148038 63149177 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu02g05483 Ovate 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05483 - - lja:Lj3g3v0160750.1 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05483 02 63148038 63149177 Tsu02g05483 02 63148038 63149177 ECH
Tsu02g05483 02 63148038 63149177 Tsu06g00271 06 2270906 2271799 PCT