Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05461 ATGGCTTCAACCTCTGATCCATCCTCTACAACTTCAGAAGGTATTTCCCAAAAAAGTTGTGAAGAAGTGAACATCAACAACAAGGGGAAGGAAGTTGTGCAATGTCAACAACATCAACCCTCCCATACAAAGTTGCTTCTTGATTTCATCAAGCTCTCAAAAGATGATTCAATTCGTTGGTCGAAAGTCCAAGAGCGTGATTTTTTCACCCCCACAAAAAATTTGGAGGTCGGTTCATCTTTGTTAAGTTGGTCTAATAAGAAGACCAACAACGAAAATAACAGGAAGAATAAGTCATTTGACTCGAAGATTTTTTCATGCAGCTTTTGTATGAAACAATTTTCTACTCCACAGGCTTTAGGAGGGCACCAAAATGCTCATAAGCATGAGCGTGCACTCGCAAAACAGCGTCAAGAGATTCATAATGGTTTTGGGATCCCTCACCATCCTTATCCTTACTACACTAATTATCCTAGCCTTTCTTCATCTTATTATGGGTTTGGATCTTTTAATAAACCACTTGGAATTAAGATGGAATCTATGATCCACAAGCCAAGCTATTCATTGATCCCACCTCCTTATAAGTTTGGTTCTACTCCTACATGGGCACACTTTTCTTCACTTGGCGGATTGAAGATTGAGGGTCTTAACACAAATAATGGAAGTAGTGCAACACCAACTTGGTggaataatgtgataaaattagaaaatattggAGGGTCTTCTATAAATGTTGCTACAAATTCCAACTTAATTGTAGACAATTCAGCCGTGGTCATCGCAAATAACGATCATCACGGTATAAAGAAGGAAGAAGACTCTGATTCTGAATCTAATGGTCTTGATTTGTCGCTTAAGCTTTAA 864 0.375 MASTSDPSSTTSEGISQKSCEEVNINNKGKEVVQCQQHQPSHTKLLLDFIKLSKDDSIRWSKVQERDFFTPTKNLEVGSSLLSWSNKKTNNENNRKNKSFDSKIFSCSFCMKQFSTPQALGGHQNAHKHERALAKQRQEIHNGFGIPHHPYPYYTNYPSLSSSYYGFGSFNKPLGIKMESMIHKPSYSLIPPPYKFGSTPTWAHFSSLGGLKIEGLNTNNGSSATPTWWNNVIKLENIGGSSINVATNSNLIVDNSAVVIANNDHHGIKKEEDSDSESNGLDLSLKL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05461 287 Gene3D Classic Zinc Finger 83 144 - -
Tsu02g05461 287 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 12 287 - -
Tsu02g05461 287 SUPERFAMILY beta-beta-alpha zinc fingers 101 142 IPR036236 -
Tsu02g05461 287 MobiDBLite consensus disorder prediction 1 20 - -
Tsu02g05461 287 ProSitePatterns Zinc finger C2H2 type domain signature. 107 129 IPR013087 -
Tsu02g05461 287 MobiDBLite consensus disorder prediction 268 287 - -
Tsu02g05461 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Tsu02g05461 287 PANTHER ZINC FINGER PROTEIN JAGGED 12 287 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05461 Tsu-Chr2 63035012 63035875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05461 99 186 C2H2 Transcription Factor Family AT5G10970 44.565 1.39e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05461 - - cam:101494832 241.891