Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05421 ATGCACGAGGAACATGAAAGGGCTAGCATGGAACATCATAGACGAGGTGTACGAGTTAATAACATGTCTTTTGATGAAAGAACAGTGATTGCTAGGTCGATCTTAAGAGTGTTACCGCCGGGAAAATTCTATAATAGAGACGAAACCAATAATTGTCCTATTTGCAAGGAAGAATTTAAGAAAGGAGAGTTGATTCAACCTTTTGCTTTATGTGCACATCAATTTCATTCTTGGTTACTTGGGGGAAAAACAACTTGCCCTATTTGTCGTCAAGATTTATCAACTATAGTTtga 294 0.3707 MHEEHERASMEHHRRGVRVNNMSFDERTVIARSILRVLPPGKFYNRDETNNCPICKEEFKKGELIQPFALCAHQFHSWLLGGKTTCPICRQDLSTIV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05421 97 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 19 93 - -
Tsu02g05421 97 PANTHER OS06G0666500 PROTEIN 19 93 - -
Tsu02g05421 97 SUPERFAMILY RING/U-box 45 95 - -
Tsu02g05421 97 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 96 IPR013083 -
Tsu02g05421 97 ProSiteProfiles Zinc finger RING-type profile. 52 90 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05421 Tsu-Chr2 62722125 62722418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05421 46 91 C3H Transcription Factor Family AT4G38140 41.176 8.21e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05421 K15706 - mtr:MTR_4g073810 97.8265