Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g05421 | ATGCACGAGGAACATGAAAGGGCTAGCATGGAACATCATAGACGAGGTGTACGAGTTAATAACATGTCTTTTGATGAAAGAACAGTGATTGCTAGGTCGATCTTAAGAGTGTTACCGCCGGGAAAATTCTATAATAGAGACGAAACCAATAATTGTCCTATTTGCAAGGAAGAATTTAAGAAAGGAGAGTTGATTCAACCTTTTGCTTTATGTGCACATCAATTTCATTCTTGGTTACTTGGGGGAAAAACAACTTGCCCTATTTGTCGTCAAGATTTATCAACTATAGTTtga | 294 | 0.3707 | MHEEHERASMEHHRRGVRVNNMSFDERTVIARSILRVLPPGKFYNRDETNNCPICKEEFKKGELIQPFALCAHQFHSWLLGGKTTCPICRQDLSTIV | 97 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g05421 | 97 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 19 | 93 | - | - | |
Tsu02g05421 | 97 | PANTHER | OS06G0666500 PROTEIN | 19 | 93 | - | - | |
Tsu02g05421 | 97 | SUPERFAMILY | RING/U-box | 45 | 95 | - | - | |
Tsu02g05421 | 97 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 32 | 96 | IPR013083 | - | |
Tsu02g05421 | 97 | ProSiteProfiles | Zinc finger RING-type profile. | 52 | 90 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g05421 | Tsu-Chr2 | 62722125 | 62722418 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g05421 | 46 | 91 | C3H Transcription Factor Family | AT4G38140 | 41.176 | 8.21e-07 | 42.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g05421 | K15706 | - | mtr:MTR_4g073810 | 97.8265 |