Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05412 atGGGAAAAGCTTCTAGGTGGTTAAAGGGATTGTTTGGaatgaagaaggagaaggaaCATAGTAACAAATCAGGTCCATTGGTTTTTGacaagaaggagaagaaaatatCAGTGAAAGATGATAATCACATTTCTCAAACCAATGATGCAGCATTTGATGCTAATGCTTGGTACAGATCCTATGTTGCTGAAAAACAGAATGAGCATagaaaaaatgcaattttgctGAGGTCATTAAGCCATGGCAGTGGCAGATTGTTTTTTGGAAGCAAGGAGAAGTTGGCTGCTGTAAAGATCCAAACTTTTTTCAGAGGCTATTTGGCGCGAAGGGCTCTTAGAGCGCTAAAAGCACTTGTTAAGATACAAGCTCTTGTTAGAGGGTACCTAGTTCGAAAAAGGGTTGCTGCAACACTTCACAGTATGCAAGCTCTCATGAGAGTTCAAGCTGTTATCCGGTCAAGGCGAGCTCGTAATTCCATCGGCAAGGAAAACATATATCAGTCAGAAATTCGTGGGCGAAAACATGTGCAAATATTTGATGAAACTAGAAATGAACAACACAATAAATGGCTTCCAAATTCGTCAAGTAAATTTGCTCCAAACCCGAAAATTGTTGTGGTTGATCCTCACAGGTCTCGTCCGAGATCTACAATGTCTGAATCTGGAGATGATCTGCATGATTACTATGAAGCAACATCATCCTCTCTTCCTTATCCAATTCCACGTCGAATCTCAGTTCATGAATGCCAAAATTCTCAAGATTTTGATTGGTCTGTCGATAATGTTAACAATGAACGTAAGTTCTACACGGCTCATAGCACTCCTAGATTAGCGAATTTTACACAAGCTAAAACTCCGGAGAAGAGTATTTCTGGAGAGACCTGCTTGTTCTTGCCTTACGCCAATTTTCCTAACTACATGGCTAATACTCATTCATCTAAGGCAAGAGTAGTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAGCTCAATAAAAGGGTTCCACTTGATGAAATCATGGCCAAAAGAAATAGCATAAGTTGTGTTAGAATGCATTGGTAA 1062 0.3823 MGKASRWLKGLFGMKKEKEHSNKSGPLVFDKKEKKISVKDDNHISQTNDAAFDANAWYRSYVAEKQNEHRKNAILLRSLSHGSGRLFFGSKEKLAAVKIQTFFRGYLARRALRALKALVKIQALVRGYLVRKRVAATLHSMQALMRVQAVIRSRRARNSIGKENIYQSEIRGRKHVQIFDETRNEQHNKWLPNSSSKFAPNPKIVVVDPHRSRPRSTMSESGDDLHDYYEATSSSLPYPIPRRISVHECQNSQDFDWSVDNVNNERKFYTAHSTPRLANFTQAKTPEKSISGETCLFLPYANFPNYMANTHSSKARVVRSHSAPKQRPELNKRVPLDEIMAKRNSISCVRMHW 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05412 353 Pfam IQ calmodulin-binding motif 95 113 IPR000048 GO:0005515
Tsu02g05412 353 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Tsu02g05412 353 Pfam Protein of unknown function (DUF4005) 283 347 IPR025064 -
Tsu02g05412 353 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Tsu02g05412 353 Gene3D - 46 116 - -
Tsu02g05412 353 PANTHER IQ-DOMAIN 5-RELATED 1 343 - -
Tsu02g05412 353 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 343 - -
Tsu02g05412 353 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Tsu02g05412 353 Gene3D - 117 160 - -
Tsu02g05412 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 134 IPR027417 -
Tsu02g05412 353 SMART iq_5 114 135 IPR000048 GO:0005515
Tsu02g05412 353 SMART iq_5 91 113 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05412 Tsu-Chr2 62618213 62619956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05412 1 351 IQD Protein Family AT3G16490 38.693 1.70e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05412 - - gmx:100797686 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05412 02 62618213 62619956 Tsu02g05412 02 62618213 62619956 ECH
Tsu02g05412 02 62618213 62619956 Tsu08g00390 08 3809485 3811930 PCT