Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05403 atgcaCATTAGATCAATGTATTcagaaagaaaaatgaagatgaatagtaaagtattttttgttatgtttgcATTTGTGTTTTTTGAATGGGGGAATGCACAAGATGATGCTATTGTTCCAGCAATTATTACATTTGGTGACTCTGCTGTTGATGTGGGAAACAATGACTATCTTTACACTCTTTTCAAAGCTAACTATCCTCCTTATGGAAGAGATTTTGTTAACCATAAACCTACTGGGAGGTTTTGCAATGGAAAATTAGCTACTGATATTACTGCTGAAACACTGGGTTTTACGAGATATGCCCCTGCGTATCTTAGCCCTCAAGCAACAGGAAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCATCCGGTTATGATGAAAAGGCTGCTATTTTGAATCACGCAATTCCATTGTCGCAACAGTTACAATATTACAAGGAATACCAAGGCAAGCTGAACAAGATAGCTGGTAGAAAAAAAGCAGCATCAATTATTAAAGGTGCATTGTACATATTGAGTGGTGGAAGTAGTGACTTTATTCAAAACTATTATACCAATCCTTTAATCAACAAATTTGTTACTCCTGATCAATATTCTTCATTCCTTGTGGATACATTCTCAAGCTTTGTTAagGATTTGTATAAATTGGGAGCTAGAAAAATTGGAGTGACTTCACTTCCACCATTGGGTTGTCTACCTGCTACAAGAACATTATTTGGATTTCATGAGAATGGTTGTGTCACAAGAATCAACAATGATGCACAAGGATTTAACAAGAAAATGAACTCGACCGCGGCAAAACTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTctttaatattttcaaacctctctATGACCTTGTTCAATCCCCTTCAAATTTTGGTTTCACGGAGGCAAGGAGAGGCTGCTGTGGAACTGGGATTGTTGAGACGACATCCTTATTGTGTAATCCAAAGTCACTAGGAACTTGTTCTAATGCAACTCAGTATGTGTTTTGGGATAGTGTCCATCCTTCGGAAGCTGCTAACCGAGTTCTAGCCGATGCATTGATCGTACAAGGCATAAACCTTATCGGTTAA 1095 0.3562 MHIRSMYSERKMKMNSKVFFVMFAFVFFEWGNAQDDAIVPAIITFGDSAVDVGNNDYLYTLFKANYPPYGRDFVNHKPTGRFCNGKLATDITAETLGFTRYAPAYLSPQATGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLQYYKEYQGKLNKIAGRKKAASIIKGALYILSGGSSDFIQNYYTNPLINKFVTPDQYSSFLVDTFSSFVKDLYKLGARKIGVTSLPPLGCLPATRTLFGFHENGCVTRINNDAQGFNKKMNSTAAKLQKQLPGLKIVVFNIFKPLYDLVQSPSNFGFTEARRGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANRVLADALIVQGINLIG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05403 364 Pfam GDSL-like Lipase/Acylhydrolase 42 354 IPR001087 GO:0016788
Tsu02g05403 364 CDD SGNH_plant_lipase_like 40 356 IPR035669 -
Tsu02g05403 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 362 - -
Tsu02g05403 364 Gene3D SGNH hydrolase 29 359 IPR036514 -
Tsu02g05403 364 PANTHER GDSL ESTERASE/LIPASE EXL3 13 362 - -
Tsu02g05403 364 SUPERFAMILY SGNH hydrolase 42 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05403 Tsu-Chr2 62581275 62583154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05403 14 356 Pollen Coat Proteome AT1G75910 33.526 1.87e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05403 - - gmx:100795716 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05403 02 62581275 62583154 Tsu02g05403 02 62581275 62583154 ECH
Tsu02g05403 02 62581275 62583154 Tsu08g00400 08 3878531 3881078 PCT