Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05397 ATGGCAGGACACTTGTTTCTTACAATGTTTTTACTTTCTTTAACTCCTGCTTTCATTGTTCATGCCCAGAACAACCAATTAGGATTCATTAGTATTGACTGTGGACTAGTAGATAAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTGGGATGTCAACTTCACAGATACTGGTGTAAGTAAAAGCATATCATCTAAACACAAAACTTCCCTTGAAAGACAGTTTTGGAATGTTAGAAGCTTCCCAAAAGGAACAAGGAACTGCTACACCCTTTTTGTTTCACAAGGAAGTAGCAAGAAATATTTAGTCAGGGCAAGTTTTGTGTATGGTAATTATGATGGCAAAAACTCACTTCCTGAATTTGATATCTATCTTGGAACTAAATGGTGGGAATCTGTAGTATTTGAAGATTCATCTAGTGTAATTACCAAGGAAATTATTTATGCTGCTTCCTCAGATTATGtgcatgtttgtttgtttaatacTGGCAAGGGTACACCTTTTATATCAGTTTTAGAACTTAGAGTTCTAAACAGTGATGCTTATCTTGTTAACTCTTTGGAGCTTTTGGGAAGGTTTGATGTAGGCTTAAAGGGTAGTCAAAAAATCAGATATCCAGATGATATTTATGACAGAACATGGACACCTTATAACTCAATTGATTGGAAAATGGTAAATACTTCACTCACCATAGACCAAGGATCACCTTCATTCAACTTTTTACCACTACCACCTTCCACTGTCATGAGAACAACATCAATTCCAGCAAATGTTAGTGACAACATAGAATTTCACTTCCTTCCCAAGTATAATGCCTCCAGGTCCAGGTATTATGTGTATATGTACTTTGCTGAAATCCAGAAACTCGAGGCAAATCAAATTAGAGAGTTTAACATTTTTGTAAATGGAAAGCTTTTAAATACTGAGCCACTCATTCCTTTGTATCTTCAAAGCCTGTATTATATATCAGTTATAGATGAAAATAAGTTGGAACTTTGGTTTAATAAGACTAGTAGATCAACTCTTCCACCACTTTTCAACGCGATCGAGATATATATGACAAAGGACTTCTTACAATCAGAAACATATCAAACGGACGTTGAAGCTATCTTAAATGTGAAGTCAAATTATGAGATAAAGAGAAACTGGCAGGGAGATCCATGTACTCCAGTGTCTTACTTGTGGAAGGGTCTAAACTGCAGCTATGCTGGATATAGTTCACCAAGGATCGTATACTTGAACTTAACTTCTAGCGGTTTAATTGGAAATATAGCTCCTGCCATATCCAATCTGAGGTCAATAGAATATTTaGATTTGTCGAATAATAGTTTGACTGGAGCTATGCCTGATTTCCTATCTCAGCTGCGCTTCTTGCGAGTTCTAAACCTTGAAGGAAATCAATTATCAGGAGCAATTCCAATGCAACTCCTCGTGCGTTCAGAGAATAGTAGGCTCAAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGTAACAAGATGAATAAGGCTGTAGTTCCATTAGTAGCATCACTCGGTGGTGCTTTCATGATACTAGCAGTAGCAACGATTTCTTTTCGCATATACTACAAGAGACACCAAGTTTCCTATAATGTGAGCAAGCTGGGTGGTTATTCAAGAATAAAGCAGGAACTAgagtcaaagaaacaagaattcaCCTATGAAGAAGTATTAAGCATTACCAGAAACTTTGAAAAGGTTGTGGGGAAAGGAGCATCTGGAATAGTCTATCATGGTTGGATTGATCATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCGAATCAGCTCAAGGATATATGCAATTTCAAGCAGAGGCCAAACTTTTTGCTGTAGTTCATCATAAATACTTGACTGGTCTTATAGGTTACTGTGATGATGGCACCAACATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCCAAGCACTTATCAGataaaaatgaaaatatattgaGTTGGAATCAACGACTTCAAATTGCAGTGGACACTGCAGAAGGATTGGAGTATCTGCATCATGGCTGCAATCCGCCAATTGTTCACAGAGATGTTAAATCTAAAAACATCTTACTAAATGAAAAATTCCAAGGTAAACTAGCTGATTTTGGGTTGTCAAAGATCTTCCCTAACGAAGGCGACACTCATATCTTCACGGTTGTTGCTGGCACGATAGGATACCTCGACCCTGAgtACAATAGATTAAGCAggttgaaagaaaaaagtgatGTTTTCAGTTTTGGAGTAGTTTTGCTTGAGATAATTACAGGACAACCAGCTATAACCAAAACCGAAGAGAAAATTCATATTATTCAATGGATTAGTTCTATGCTGCTGGAAAGAGAGGTAAAAGATATTGTGGATCCAAGATTAAAGGGAGAATTTGATATTAACTATGCAACTAAAGCCTTAGATATTGCAATGGCTTGTGTAGCAAAAACTTCAATCAATAGGCCAACCATGACGCATGTAGTTATGGAACTGAAACAATGTTTCGAGAACAAGATCACGCATCTGTCTGACTCTGGTTACACTCCTGAGAGTTTACCAGACACCTTAAATTCTGTGTCCTTTGACAGAATTAGTGGCGAGAGCTCTCTAGCGAGGTAG 2655 0.3657 MAGHLFLTMFLLSLTPAFIVHAQNNQLGFISIDCGLVDKPSYTDETTSIYYTWDVNFTDTGVSKSISSKHKTSLERQFWNVRSFPKGTRNCYTLFVSQGSSKKYLVRASFVYGNYDGKNSLPEFDIYLGTKWWESVVFEDSSSVITKEIIYAASSDYVHVCLFNTGKGTPFISVLELRVLNSDAYLVNSLELLGRFDVGLKGSQKIRYPDDIYDRTWTPYNSIDWKMVNTSLTIDQGSPSFNFLPLPPSTVMRTTSIPANVSDNIEFHFLPKYNASRSRYYVYMYFAEIQKLEANQIREFNIFVNGKLLNTEPLIPLYLQSLYYISVIDENKLELWFNKTSRSTLPPLFNAIEIYMTKDFLQSETYQTDVEAILNVKSNYEIKRNWQGDPCTPVSYLWKGLNCSYAGYSSPRIVYLNLTSSGLIGNIAPAISNLRSIEYLDLSNNSLTGAMPDFLSQLRFLRVLNLEGNQLSGAIPMQLLVRSENSRLKSNFGGNPNLCSSGSCNKMNKAVVPLVASLGGAFMILAVATISFRIYYKRHQVSYNVSKLGGYSRIKQELESKKQEFTYEEVLSITRNFEKVVGKGASGIVYHGWIDHDTEVAVKMLSSESAQGYMQFQAEAKLFAVVHHKYLTGLIGYCDDGTNMALIYEYMANGDLAKHLSDKNENILSWNQRLQIAVDTAEGLEYLHHGCNPPIVHRDVKSKNILLNEKFQGKLADFGLSKIFPNEGDTHIFTVVAGTIGYLDPEYNRLSRLKEKSDVFSFGVVLLEIITGQPAITKTEEKIHIIQWISSMLLEREVKDIVDPRLKGEFDINYATKALDIAMACVAKTSINRPTMTHVVMELKQCFENKITHLSDSGYTPESLPDTLNSVSFDRISGESSLAR 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05397 884 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Tsu02g05397 884 SMART serkin_6 575 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05397 884 PANTHER TYROSINE KINASE FAMILY PROTEIN 9 884 - -
Tsu02g05397 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Tsu02g05397 884 Gene3D Ribonuclease Inhibitor 369 492 IPR032675 -
Tsu02g05397 884 Pfam Protein kinase domain 578 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05397 884 SUPERFAMILY Protein kinase-like (PK-like) 560 843 IPR011009 -
Tsu02g05397 884 Pfam Leucine rich repeat 412 471 IPR001611 GO:0005515
Tsu02g05397 884 ProSiteProfiles Protein kinase domain profile. 575 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g05397 884 Gene3D Phosphorylase Kinase; domain 1 556 650 - -
Tsu02g05397 884 SUPERFAMILY L domain-like 375 498 - -
Tsu02g05397 884 PANTHER OS07G0107800 PROTEIN-RELATED 9 884 - -
Tsu02g05397 884 Gene3D Transferase(Phosphotransferase) domain 1 651 859 - -
Tsu02g05397 884 Pfam Malectin-like domain 32 356 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05397 Tsu-Chr2 62524665 62529185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05397 6 845 Receptor kinase-like Gene Family AT2G19210 48.598 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu02g05397 Malectin_like 2.1e-99 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05397 - - gmx:100778537 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05397 02 62524665 62529185 Tsu02g05397 02 62524665 62529185 ECH
Tsu02g05397 02 62524665 62529185 Tsu08g00412 08 4132053 4140810 PCT